Pairwise Alignments

Query, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 77/338 (22%), Positives = 148/338 (43%), Gaps = 56/338 (16%)

Query: 24  LGLGLLVGMGGWAAFAKLAGA-VVATGRVVVEGNSKKIQHLSGGIVSEINVVEGDRVAAG 82
           L   ++V  G +A +    G+  ++T          ++    GGI++++NVV+ + V  G
Sbjct: 37  LAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQG 96

Query: 83  QILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAEEPSFTVTEDLTALTSSKSAKTF 142
            +L++L  T   A L++++   A L   + R+R+ +A +      E L+A+  ++ A   
Sbjct: 97  DVLVQLDDT--DARLALLQAE-ADLALAKRRVRSYLAND------EGLSAMVEAQEA--- 144

Query: 143 IDSEQNLFNSRRNALIGMKKQLATRKLQLADEARGLDVQVEATENELAIVKEDVSKTDEL 202
                   N +R                       +  Q++A + +    K D+S+ ++L
Sbjct: 145 --------NEQR-----------------------VKAQLKAAQADFERAKIDLSRREDL 173

Query: 203 LKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVG-KLSELDLQLLQLDEDRKSEVTK 261
           ++ G V+ + L   K   +  +       AA AQ    KLS +  Q       + +    
Sbjct: 174 VRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKLSTIGSQ-------KANAALT 226

Query: 262 DLTSIEAT--VAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLMLVV 319
           D T++++   V   + R    +  L+R  IR+PI+G + +  V  +   +Q G  LM VV
Sbjct: 227 DNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQ-VGRRVQVGMPLMTVV 285

Query: 320 PDKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTT 357
           P  D + ++AN    ++  + VGQPVT+    +    T
Sbjct: 286 PT-DHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVT 322