Pairwise Alignments

Query, 523 a.a., signal recognition particle protein from Agrobacterium fabrum C58

Subject, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

 Score =  444 bits (1142), Expect = e-129
 Identities = 242/463 (52%), Positives = 313/463 (67%), Gaps = 11/463 (2%)

Query: 1   MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV 60
           MFENL DRL   L  ++G+G LTE ++   LREVR ALLEADVAL VVR F +RV+E AV
Sbjct: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60

Query: 61  GAAVLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKI 120
           G  V KS+ PGQ  +KIV  +L  ++G    +++L A  P VI+M GLQG+GKTT+ GK+
Sbjct: 61  GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL 120

Query: 121 AKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAAK 180
           +K L +RDKKKVL+ S D  RPAA +QL  L    GVD  P    Q P DIA  A+  AK
Sbjct: 121 SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK 180

Query: 181 LGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV 240
              +DV+I+DTAGR  IDE +M E+  + K  NP E L V D++TGQDA + A+ F + +
Sbjct: 181 KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL 240

Query: 241 GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGDI 300
            +TG++LT++DGD RGGAALS+R +TGKPIK IG+GE+ + L+ FHP RIA RILGMGD+
Sbjct: 241 PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV 300

Query: 301 VSLVEKAAENIDAEKARSMAEKMAKGK-FDLNDLADQLGQMKKMGGMGGIMGLMPGM--- 356
           +SL+E    N+D EKA  +A+K  + K FDL D  +QLGQMK MGGM G++  +PGM   
Sbjct: 301 LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL 360

Query: 357 -AGMKDKMASAGMNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDAAEINK 415
            A MKDK     ++D++F +  AII+SMT  ER NPD++K SRKKRIAAGSGT   ++N+
Sbjct: 361 PADMKDK-----VDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNR 415

Query: 416 LLKMHRGMADMMKAMGGKGKGGIMKQMMGGLAGKMGLGGMMGG 458
           LLK    M  MMK M   G  G+M+ M  GL G  G GG  GG
Sbjct: 416 LLKQFTQMQKMMKKMQQGGMKGMMRNMQ-GLMGGGGRGGFGGG 457