Pairwise Alignments

Query, 523 a.a., signal recognition particle protein from Agrobacterium fabrum C58

Subject, 457 a.a., signal recognition particle protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  427 bits (1099), Expect = e-124
 Identities = 234/461 (50%), Positives = 304/461 (65%), Gaps = 10/461 (2%)

Query: 1   MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV 60
           MFENL DRL   L  ++GRG LTE ++   LREVR ALLEADVAL VVR F + V+E+AV
Sbjct: 1   MFENLTDRLSRTLKTISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFVNAVKERAV 60

Query: 61  GAAVLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKI 120
           G  V KS+ PGQ+ VKIV  EL + +G    +++L A  P VIMM GLQG+GKTT+  K+
Sbjct: 61  GQDVAKSLTPGQVFVKIVQSELEKAMGEANEALNLAAQPPAVIMMAGLQGAGKTTSVAKL 120

Query: 121 AKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAAK 180
           +K L  R KK VL+ S D  RPAA +QL  L  +  V+  P    Q P DIA  A+  AK
Sbjct: 121 SKFLRTRQKKSVLVVSADVYRPAAIKQLETLAKEVEVEFFPSDVSQKPIDIANAAISHAK 180

Query: 181 LGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV 240
           L   DVVILDTAGR H+DE +M E+  +     P E L V D++TGQDA N A+ F+E +
Sbjct: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL 240

Query: 241 GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGDI 300
            +TG+VLT++DGD RGGAALS+R +TGKPIK +G+GE+ + L+ FHP R+A RILGMGD+
Sbjct: 241 PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV 300

Query: 301 VSLVEKAAENIDAEKARSMAEKM-AKGKFDLNDLADQLGQMKKMGGMGGIMGLMPGMAGM 359
           +SL+E+    +D EKA  +A K+ + G FDL D  +QL QMK MGGM G++  +PG+  +
Sbjct: 301 LSLIEQVERGVDKEKAMKLASKVKSGGNFDLEDFREQLQQMKNMGGMMGLLEKLPGVGQL 360

Query: 360 KDKMASAGMNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDAAEINKLLKM 419
             +  +   + KM  +  AII+SMT  ER NPDI+K SRK+RIAAGSGT   ++N+LLK 
Sbjct: 361 PPEAMAQIQDGKMTRQMEAIINSMTPGERQNPDIIKGSRKRRIAAGSGTQIQDVNRLLKQ 420

Query: 420 HRGMADMMKAMGGKGKGGIMKQMMGGLAGKMGLGGMMGGGM 460
              M  MMK M    KGG+ K M         +GGMM GGM
Sbjct: 421 FTQMQKMMKKM--SSKGGMQKMM-------RAMGGMMPGGM 452