Pairwise Alignments

Query, 523 a.a., signal recognition particle protein from Agrobacterium fabrum C58

Subject, 504 a.a., Signal recognition particle protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  551 bits (1420), Expect = e-161
 Identities = 301/531 (56%), Positives = 386/531 (72%), Gaps = 46/531 (8%)

Query: 1   MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV 60
           MF+ L  RLG +L+ L  RG+L+EADV AA+REVR ALLEADVAL VV+ F  +V+E+A+
Sbjct: 1   MFDGLSGRLGDVLDKLRRRGSLSEADVDAAMREVRVALLEADVALAVVKQFVAQVKEQAI 60

Query: 61  GAAVLKSIKPGQMVVKIVHDELVEMLGTEG----------VSIDLHAAAPVVIMMVGLQG 110
           G  V++S+ PGQMVVK+VHD LV+ML  EG          + ID+    PV I+MVGLQG
Sbjct: 61  GQEVIRSVTPGQMVVKLVHDALVDMLSGEGGVEAEPDPMSLGIDIAHTPPVPILMVGLQG 120

Query: 111 SGKTTTTGKIAKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTD 170
           SGKTTT+ KIA R+T R++KKVLMASLD  RPAAQ QL  LG QTGVDTL ++ GQ P +
Sbjct: 121 SGKTTTSAKIALRITKRERKKVLMASLDVYRPAAQRQLAILGEQTGVDTLEVVMGQKPVE 180

Query: 171 IAARAVQAAKLGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAV 230
           IA RA+QAA++GG+DVVILDTAGR HIDE LM E+A+++   NPHE+LLV D++TGQDAV
Sbjct: 181 IARRAMQAARVGGYDVVILDTAGRLHIDEVLMTEVAEVRALVNPHEVLLVTDAMTGQDAV 240

Query: 231 NLARNFDERVGITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRI 290
           N+A+ F+E+VG+TG+VLTR+DGD RGGAALSMRAVTG PIKL+G+GE+M+ L+ FH +RI
Sbjct: 241 NVAQEFNEKVGVTGIVLTRVDGDSRGGAALSMRAVTGVPIKLMGMGEKMDALEAFHAQRI 300

Query: 291 ADRILGMGDIVSLVEKAAENIDAEKARSMAEKMAKGKFDLNDLADQLGQMKKMGGMGGIM 350
           A RILGMGD+V+LVEKAAE I+ ++A  +A++M +GKFDL D+  Q+ Q+KKMG M G++
Sbjct: 301 AGRILGMGDVVALVEKAAETIEMDQAERVAKRMMEGKFDLEDMLAQIRQIKKMGDMKGLL 360

Query: 351 GLMPGMAGMKDKMASAGMNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDA 410
           G+MPG++ M+ +MA + ++D M  RQ AII SMT  ER NPD++K SRKKRIA GSG++ 
Sbjct: 361 GMMPGISKMQRQMAESKIDDNMMKRQEAIILSMTIKERRNPDLVKASRKKRIADGSGSNV 420

Query: 411 AEINKLLKMHRGMADMMKAMGGKGKGGIMKQMMGGLAGKMG-LGGMMGGGMPDLSNIDPK 469
            E+NKLLK H+ MA +MK M          + MGG  G MG LGGM GGG  D  ++   
Sbjct: 421 PEVNKLLKQHQQMAVVMKKM----------KKMGGKKGLMGLLGGMGGGGEGDAPDL--- 467

Query: 470 QLEALQKQAEAAGLGKPGAMPGMGGLPGGLPGLGGAKLPGLGGMPGLPGFP 520
                      + LG  G     GGLP G PGLGG +    GG+P  PGFP
Sbjct: 468 -----------SALGGAG-----GGLPPGFPGLGGPR----GGLP--PGFP 496