Pairwise Alignments

Query, 523 a.a., signal recognition particle protein from Agrobacterium fabrum C58

Subject, 504 a.a., signal recognition particle protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  573 bits (1476), Expect = e-168
 Identities = 316/524 (60%), Positives = 377/524 (71%), Gaps = 21/524 (4%)

Query: 1   MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV 60
           MFENL DRL  + + LT +GAL+EADVA ALREVR ALLEADV+L V R F   V+EKA 
Sbjct: 1   MFENLSDRLSGVFDRLTKQGALSEADVATALREVRVALLEADVSLPVARDFIKAVQEKAT 60

Query: 61  GAAVLKSIKPGQMVVKIVHDELVEML-GTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGK 119
           G AV KS+ PGQ VVKIVHDELV +L G E          P  I+MVGLQG GKTTTT K
Sbjct: 61  GQAVTKSVTPGQQVVKIVHDELVHVLQGDEDPGALKIDNPPAPILMVGLQGGGKTTTTAK 120

Query: 120 IAKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAA 179
           IAKRL +RD KK+LMASLD  RPAA EQL  LG Q GVDTLPI+ G+ P  IA RA   A
Sbjct: 121 IAKRLKERDGKKILMASLDVNRPAAMEQLAILGAQIGVDTLPIVKGEDPVAIARRAKTQA 180

Query: 180 KLGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDER 239
            LGG+DV +LDTAGR  IDE LM ++  ++  +NP E LLV D LTGQDAV  A NFD+R
Sbjct: 181 SLGGYDVYMLDTAGRLSIDEELMAQVEAVRDVANPRETLLVVDGLTGQDAVTTAENFDDR 240

Query: 240 VGITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGD 299
           +GITG+VLTRMDGDGRGGAALSMRAVTG+PI+ +G+GE+M+ L+ F P R+A RILGMGD
Sbjct: 241 IGITGVVLTRMDGDGRGGAALSMRAVTGRPIRFVGLGEKMDALETFEPDRVAGRILGMGD 300

Query: 300 IVSLVEKAAENIDAEKARSMAEKMAKGKFDLNDLADQLGQMKKMGGMGGIMGLMPGMAGM 359
           IV+LVEKA E I+AE+A  M ++  KG+F++NDL  QL QM+KMGG+ G+MG+MPGM+ M
Sbjct: 301 IVALVEKAQETIEAEQAERMMKRFQKGQFNMNDLRGQLEQMEKMGGVEGLMGMMPGMSKM 360

Query: 360 KDKMASAGMNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDAAEINKLLKM 419
           K K+  AG +DK+  RQIA+I SMTK ERANP IL+ SRKKRIA G+G + +++NKLLKM
Sbjct: 361 KGKLDEAGFDDKVIRRQIALIQSMTKKERANPQILQASRKKRIAKGAGMEVSDLNKLLKM 420

Query: 420 HRGMADMMKAMGGKGKGGIMKQMMGGLAGKMGLGGMMGGGMPDLSNIDPKQLEALQKQAE 479
           HR M+D MK MG  GK G+MK + G L G  G GGM  G   DL+ ++P  LE   K A+
Sbjct: 421 HRQMSDAMKKMGKMGKKGMMKSLGGMLGG--GKGGMPPGMPGDLAGMNPADLE---KAAK 475

Query: 480 AAGLGKPGAMPGMGGLPGGLPGLGGAKLPGLGGMPGLPGFPKKK 523
           A      G MPG     GGLPGLGG  LP     PGL GF KKK
Sbjct: 476 AM-----GKMPG-----GGLPGLGGGALP-----PGLSGFGKKK 504