Pairwise Alignments

Query, 299 a.a., diaminopimelate epimerase from Agrobacterium fabrum C58

Subject, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

 Score =  151 bits (382), Expect = 1e-41
 Identities = 104/299 (34%), Positives = 156/299 (52%), Gaps = 43/299 (14%)

Query: 5   VEFAKMNGLANKILVVDMRGRKDMVTPAAAIALNSNPATQFDQIMAIHDPRVG-GTDAFI 63
           ++F KM+GL N  + VD   +K           N N  ++F     + D   G G+D  +
Sbjct: 1   MKFTKMHGLGNDYIYVDAISQK---------IENPNEISKF-----VSDRHFGIGSDGLV 46

Query: 64  DIL------------NCDGTKAQACGNGTRCVVQALSSE--TGKTSFTFQTVAGI-LNAV 108
            IL            N DG++A+ CGN  RCV + +  +  T K++ T +T+AGI +  +
Sbjct: 47  LILPSDVADFKMRMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEM 106

Query: 109 EHEDG---MISVDMGLPRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPH 165
             E+G   ++ VDMG P  +  +IP+  E H    I+ +I   D    ++   +SMGNPH
Sbjct: 107 TIENGKVVLVKVDMGEPILKAEEIPVLSEKHPV--IDEEITAKD--YCYNFTCVSMGNPH 162

Query: 166 AIFWVDRDPMTFDLERFGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACG 225
           AI +++     F LE+ GPL E H  FP K N+   ++I  + ++ R WERGAG TLACG
Sbjct: 163 AITYIENVD-EFPLEKIGPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACG 221

Query: 226 SAACASAVSAARTGRTGRKVTIDVASSPVRVPLTIDWRE-DNHVVMTGPAEWEWSGSVD 283
           + ACA   ++   G  GRK T+ +        LTI+W E D H+ MTGPA   + G +D
Sbjct: 222 TGACAVLTASVLKGYVGRKATVKLLGG----DLTIEWNEFDKHIYMTGPATTVFEGEID 276