Pairwise Alignments

Query, 390 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 394 a.a., ribosomal RNA large subunit methyltransferase N from Phaeobacter inhibens DSM 17395

 Score =  449 bits (1154), Expect = e-131
 Identities = 228/373 (61%), Positives = 283/373 (75%), Gaps = 10/373 (2%)

Query: 3   GKPSLIGLTREEMGEALAEIGVPQKQVKMRVSQLWNWLYVRGVSDFDNMTNVAKELREKL 62
           GK +L+GLTR+++ E L   G P+KQ KMRV Q+W W+Y  G  DF  MTN+AK  R  L
Sbjct: 22  GKINLVGLTRDQLRETLIAHGTPEKQAKMRVGQIWQWIYQWGKRDFAEMTNLAKAYRADL 81

Query: 63  KAAFTIARPEIVEEQISNDGTRKWLMRFPPRGAGRPVEIETVYIPEEGRGTLCISSQVGC 122
              F IA PE+V +Q+S DGTRK+L+R     AG   E+E VYIPEEGRGTLCISSQVGC
Sbjct: 82  DEHFEIATPEVVSKQVSTDGTRKYLVRI----AGGH-EVEVVYIPEEGRGTLCISSQVGC 136

Query: 123 SLTCSFCHTGTQRLVRNLTAEEILSQLLLARDRLGDFPDGSTPVGAYVPSEGRKVSNIVM 182
           +LTCSFCHTGTQ+LVRNLTA EI+ Q+++ARD L ++P    P       E R +SNIV+
Sbjct: 137 TLTCSFCHTGTQKLVRNLTAAEIVGQIMMARDDLDEWPVPGAP-----KDETRLLSNIVL 191

Query: 183 MGMGEPLYNFEHVKTALLIATDGDGLSLSKRRVTLSTSGVVPEIFRTGDEIGVMLAISLH 242
           MGMGEPLYNFE+V+ A+ IA D +G+SLS+RR+TLSTSGVVPEI RT +EIG +LA+S H
Sbjct: 192 MGMGEPLYNFENVRDAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAEEIGCLLAVSFH 251

Query: 243 AVRDDLRDMLVPINKKYPLKELIEACRNYPGVSNARRITFEYVMLKDVNDSLEDAKMLVQ 302
           A  D++RD LVPINK++ ++ L+EA R YP ++N+ RITFEYVML  VNDS EDA  LV+
Sbjct: 252 ATTDEVRDKLVPINKRWNIEALLEALRAYPRLTNSERITFEYVMLNGVNDSDEDAHRLVE 311

Query: 303 LLKGVPAKINLIPFNPWPGTNYQCSEWAQIEKFADFINQAGYASPIRTPRGRDILAACGQ 362
           L+KG+PAK+NLIPFN WPG+ Y  S   +I  FA+ I QAGYASPIRTPRG DILAACGQ
Sbjct: 312 LIKGIPAKVNLIPFNEWPGSPYTRSSNNRIHAFANIIYQAGYASPIRTPRGEDILAACGQ 371

Query: 363 LKSESERMRKTER 375
           LKS +ER RK+ +
Sbjct: 372 LKSATERARKSRK 384