Pairwise Alignments

Query, 293 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 59.7 bits (143), Expect = 8e-14
 Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 27/270 (10%)

Query: 34  DLTVDGSFPLGAAVAAVLIIAGLNAWVATAIAMVAGAAAGMVTATLNVRFKILNLLASI- 92
           +L ++G    GA +  + +  G + W    +A ++G   G++ A L V   +   ++ + 
Sbjct: 41  NLGIEGIMTFGAMIGWLAVYNGADLWTGILVAGLSGGIFGLLHAGLTVTLGLSQHVSGLG 100

Query: 93  LTMIA------LFSVNLRVMGKPNVALLNQDTMVS-----PFYGLGLSEYLVRPLFVGVL 141
           +T+ A      +F + + V G P      Q   V      PF G  L      P +V +L
Sbjct: 101 VTLFASSFSYYVFRLLVPVAGTPPTIEPFQPIDVPALSSLPFLGPALFTQ-TPPTYVAIL 159

Query: 142 VLIAVILVWRFLESDAGLAMRATGANARMARAQGVKTGNQIYLGMALSNALVALGGA--- 198
             +A++L +    +  GLA+R TG N   A AQG+      +  + + +AL+ +GGA   
Sbjct: 160 --LALVLGYVLFRTPLGLAIRMTGENPHAAEAQGINPMAIRFGSVIVGSALMGIGGAFLT 217

Query: 199 LFAQTNGFADVTSGVGTIVVGLAAVIIGETLFGARGILIALIGCVFGSIAYRLAIQLALS 258
           L A  + F  +  G G I +   A+++  +    R ++ AL+  +F     RL  +L+  
Sbjct: 218 LSAFNSFFPTMVQGRGWICI---ALVVFASWRPGRALVGALLFALFDGFQLRLQTRLS-- 272

Query: 259 SDVLGLKASDLNFVTAVLVAIALILPRLRR 288
               G+    +  +   L++IA +    RR
Sbjct: 273 ----GVVPYQIFLMIPYLLSIAALALMARR 298