Pairwise Alignments

Query, 293 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 314 a.a., ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 19/261 (7%)

Query: 5   AFWGA-VELGLVFAFVAIGVYLAFRVLDFPDLTVDGSFPLGAAVAAVLIIAGLNAWVATA 63
           +FW A + +     F  +G  +  RV    +L ++G    GA    + + AGL  W    
Sbjct: 11  SFWAAAIRIASPLIFATLGELICERV-GVLNLGIEGIMVAGAFSGWIAVWAGLPLWGGVG 69

Query: 64  IAMVAGAAAGMVTATLNVRFKI--------LNLLASILTMIALFSVNLRVMGKPNVALLN 115
           +A++ G A G++ ATL+V F +        L LLA+ LT      V   V   P +    
Sbjct: 70  VALLTGMAFGLLHATLSVPFGLSQHVVGIGLTLLATSLTFYTYRVVLPEVSSPPKIEAFQ 129

Query: 116 --QDTMVSPFYGLGLSEYLVRPLFVGVLVLIAVILVWRFLESDAGLAMRATGANARMARA 173
             +  ++S    +G + +   PL     VL A +  +    +  GLA+RA G N     A
Sbjct: 130 PYEIPLLSDLPLIGPALFSQTPLTYAAFVL-AALCAYTLYRTPLGLAVRAAGENPSAVAA 188

Query: 174 QGVKTGNQIYLGMALSNALVALGGA---LFAQTNGFADVTSGVGTIVVGLAAVIIGETLF 230
           QG+         + + + ++A+GGA   L A  + F D+ +G G I + L  V+ G    
Sbjct: 189 QGLSVTAIRMGAVVVGSGIMAVGGAFLTLSAFDSFFFDMVNGRGWICIAL--VVFGAWRP 246

Query: 231 GARGILIALIGCVFGSIAYRL 251
           G + +L A++   F ++  RL
Sbjct: 247 G-KAVLGAILFAAFDALQIRL 266



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 219 GLAAVIIGETLFGARGILIALIGCVFGSIAYRLAIQLALSSDVLG----LKASDLNFVT 273
           G  AV  G  L+G  G+ + L G  FG +   L++   LS  V+G    L A+ L F T
Sbjct: 54  GWIAVWAGLPLWGGVGVAL-LTGMAFGLLHATLSVPFGLSQHVVGIGLTLLATSLTFYT 111