Pairwise Alignments

Query, 215 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 2e-24
 Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 4/175 (2%)

Query: 11  IAFTIAILLLAVTPGPDMTLWISRSLREGRAAGFMTLVGTNIGITVHTMLVAFGVAALIV 70
           +A+ +  ++ ++ PG      IS  L  G       ++G  IG+  H +LV  G+ AL+ 
Sbjct: 7   LAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALVA 66

Query: 71  ASPTAFMILKTGGAAYLVWLAIQAIRKGSDFVMVKSTGEKAQASLKSALLNGIWVNLLNP 130
            S  AF ++K  GAAYLVWL IQ  R  +      ++ E +QA+L   L   + +NL NP
Sbjct: 67  QSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHELSQAAL---LRKAVLINLTNP 123

Query: 131 KVIIFFMTFLPQFVSATDPHVTGKLIFLGIWSIIVALPIGIGIVVTADILSAWLQ 185
           K I+F +   PQF+  T  H   + + LGI ++ +   +  G    A  L  +++
Sbjct: 124 KSIVFLVALFPQFIDPTRDH-WPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIR 177