Pairwise Alignments

Query, 686 a.a., peptidyl-dipeptidase from Agrobacterium fabrum C58

Subject, 718 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella amazonensis SB2B

 Score =  505 bits (1301), Expect = e-147
 Identities = 273/671 (40%), Positives = 410/671 (61%), Gaps = 16/671 (2%)

Query: 21  PKFDAVKDEDFAPAFDAALFSHEQEIDAIAGNPEAPSFENTVTALEIAGDELSRISSLFW 80
           P F A+KD  F PA    +  H+ EI AIA NPE  +FENT+ A+E +G  L+R S +F+
Sbjct: 57  PNFAAIKDSHFEPALLQGIAEHKAEILAIANNPEPATFENTLVAMEKSGALLTRTSKVFY 116

Query: 81  NKAGANTNGVIQALEREIAPKMSRHYSKIGMNEALFKRIDTLWEKREALGLTGEEKRVLE 140
           N AG ++N  +QAL+ ++AP MS H   I +N  LF RI++L+ +R  LGLT EE R++E
Sbjct: 117 NLAGTDSNPTLQALQAKMAPLMSAHSDDINLNPTLFARIESLYNQRNDLGLTKEEVRLIE 176

Query: 141 RHWKGFVHSGAKLPKERQERLAAINEELAGLGAKFGQNVLADEKSWKLLLSTDEELAGIP 200
            + + FV +GAKL + ++ ++ A+NEE + L  +F Q +    K   +++++ +ELAG+ 
Sbjct: 177 VYHQRFVMAGAKLTEAQKTQIRALNEEHSKLTDEFQQRLRRLTKEIAVVVNSKDELAGLS 236

Query: 201 GFLRDAMAGAAGEHGEDGKFAVTLSRSIIEPFLTFSERRDLREQAFKAWVARGENGGETD 260
                  A  A   G DGKF ++++ +  +P L   E R+LR++ F+A   RG   GE +
Sbjct: 237 DSAIRMAAADAKAAGHDGKFLLSITNTTRQPVLAQLENRELRKRVFEASANRGLE-GENE 295

Query: 261 NREIVRRTLELREEKAKLLGYANFAAYKLDDTMAKTPDAVNGLLRQVWEKAVQRAGEEEA 320
              +V R  +LR E+A LLG+ N+A+Y+L   MA +P+AV  L   +  K V    +E A
Sbjct: 296 TASLVARLAQLRAERAALLGFDNWASYRLAPQMAGSPEAVYELFGTMVPKVVANTRKEAA 355

Query: 321 GLAAIIAEEGKNHEVLPWDWRHYAEKLRAQKFNFSEAELKPYLQLEKIIE-ACFDVAERL 379
            + A+I + G N E+ PWDW  YAEK+R +K+   E  LKPY +  +++E   F   + L
Sbjct: 356 DIQAMIDKTGGNFELKPWDWAFYAEKVRQEKYALDEESLKPYFEFNRVLEDGVFYTIKEL 415

Query: 380 FGIHAVEVKGVVGYHPDVRIFEIRDNKGDLKAMFLGDYFARPSKRSGAWMSSFQSQHKLP 439
           +G+       +  YHPDV+ +E+ D  G   A+F  DYFAR  KR GAW SSF  Q    
Sbjct: 416 YGLTMKPRPDLPVYHPDVKAYEMFDEDGTSLAIFYADYFARDGKRGGAWKSSFVDQ---- 471

Query: 440 LKDGTVGEIPIIYNVCNFAKPAEGKPALLSLDDARTLFHEFGHALHGMLSDVTYPSVSGT 499
              G +G  P++ NV N  K  +G+P  +S D+  T+FHE GH  HGMLS V YP+++GT
Sbjct: 472 --SGLLGNKPVVVNVMNIKKAPDGEPTFVSYDEVTTMFHEMGHGTHGMLSKVKYPTLAGT 529

Query: 500 GVSRDFVELPSQLYEHWLTVPEILEKYALHYETGAPMPKALLDKVLAAQTFNAGFNTVEF 559
            VSRDFVE PS   E W   P++L  YA HY++G P+PK LLDK+L +++FN GF+T+E+
Sbjct: 530 KVSRDFVEFPSTFEEDWAAHPKVLANYARHYQSGEPLPKPLLDKLLKSRSFNQGFDTLEY 589

Query: 560 TSSAIVDMAFHT---RDSVADPMAVQGEVLS--GLNMPKSIVMRHATPHFQHVFSGDGYS 614
            S+A+VD+ +H+    DS+ D  + +   L   G+++  ++  R+ + +F H F G GYS
Sbjct: 590 MSAALVDLEWHSLKAGDSLKDVASFEAAALKKHGVDI-GAVPPRYRSTYFAHAFPG-GYS 647

Query: 615 AGYYSYMWSEVLDADAFAAFEETGNAFDGEMARRLKDNIYSVGGSIDPEEAYLAFRGKMP 674
           A YY+YMWSE+L ADA+ A+ +T    + E+  + +  I  VG S+ P EAY+ FRG+ P
Sbjct: 648 ASYYAYMWSEILAADAY-AYVQTQGGLNREIGMKYRKTIREVGNSVPPMEAYINFRGQEP 706

Query: 675 SPDAMLLKRGL 685
           + D +L +RGL
Sbjct: 707 TTDGLLERRGL 717