Pairwise Alignments

Query, 686 a.a., peptidyl-dipeptidase from Agrobacterium fabrum C58

Subject, 726 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella loihica PV-4

 Score =  556 bits (1432), Expect = e-162
 Identities = 279/670 (41%), Positives = 428/670 (63%), Gaps = 8/670 (1%)

Query: 19  GLPKFDAVKDEDFAPAFDAALFSHEQEIDAIAGNPEAPSFENTVTALEIAGDELSRISSL 78
           G+P FD +K E + PAF A +  H+ EI AI  NP AP+F NT+ A+E AGD  ++++S+
Sbjct: 61  GMPDFDKIKPEHYLPAFKAGIAQHKAEIQAIIDNPAAPTFANTIEAMEFAGDLTTKVASV 120

Query: 79  FWNKAGANTNGVIQALEREIAPKMSRHYSKIGMNEALFKRIDTLWEKREALGLTGEEKRV 138
           F+N   A+TN  +QA+ +E++P +S     I +N+ LFKR+  ++++R++L L   ++++
Sbjct: 121 FYNLTSADTNEQLQAISKEVSPMLSAAGDDILLNDQLFKRVKAVYDQRDSLALNTAQQKL 180

Query: 139 LERHWKGFVHSGAKLPKERQERLAAINEELAGLGAKFGQNVLADEKSWKLLLSTDEELAG 198
           LE  +K F   GA L    + +L A+NE++  L  +FG N+LA+  +++L++    +L G
Sbjct: 181 LEDTYKSFTRGGANLSDADKVKLRALNEKIGKLSLEFGDNLLAETNAFELVIDNAADLKG 240

Query: 199 IPGFLRDAMAGAAGEHGEDGKFAVTLSRSIIEPFLTFSERRDLREQAFKAWVARGENGGE 258
           +P  + +  A  A + G  GK+  T  R  I PFLT+++ R+LRE+ +K +V RG N   
Sbjct: 241 LPQDVINTAAQTAEKKGHPGKWVFTTQRPSITPFLTYADNRELREKIYKGYVERGNNNNA 300

Query: 259 TDNREIVRRTLELREEKAKLLGYANFAAYKLDDTMAKTPDAVNGLLRQVWEKAVQRAGEE 318
            DN++I+ +   LR E+A+L+GY + A + L++  AKTP+ V GLL +VW  A+ +A  E
Sbjct: 301 HDNKKILAQMAALRAERAQLMGYKSHAHFVLEERTAKTPENVYGLLDKVWPAALGQAKAE 360

Query: 319 EAGLAAIIAEEGKNHEVLPWDWRHYAEKLRAQKFNFSEAELKPYLQLEKIIEACFDVAER 378
            A +  +I  EG N ++  WDW +YA+K+R  K++F+E E +PY  LE  ++  F  A R
Sbjct: 361 VAVMQELIDAEGGNFKLAAWDWWYYADKIRVAKYSFNEQETRPYFSLENTLKGVFYTANR 420

Query: 379 LFGIHAVEVKGVVGYHPDVRIFEIRDNKGDLKAMFLGDYFARPSKRSGAWMSSFQSQHKL 438
           L+GI   E   +  Y+ +VR +E+ D  G L A+FLGDY+ R SKR GAW ++++ Q+++
Sbjct: 421 LYGITVKERTDLPKYNDEVRTWEVYDKDGSLMAIFLGDYYVRDSKRGGAWANAYRKQYRM 480

Query: 439 PLKDGTVGEIPIIYNVCNFAKPAEGKPALLSLDDARTLFHEFGHALHGMLSDVTYPSVSG 498
                 V   PII NV N+ +P   +PALL+ D+A TLFHEFGHALH MLSDV Y S +G
Sbjct: 481 ----HGVESKPIIVNVLNYPRPVGDEPALLTFDEASTLFHEFGHALHAMLSDVEYRSQAG 536

Query: 499 TGVSRDFVELPSQLYEHWLTVPEILEKYALHYETGAPMPKALLDKVLAAQTFNAGFNTVE 558
           T V RD+VE PSQ+ E+W+T PE+L ++A HY+TG  +P++L++K+ AA  FN GF TVE
Sbjct: 537 TSVPRDYVEFPSQVMENWMTQPEVLAQFAKHYKTGEVIPQSLVEKIQAASKFNQGFATVE 596

Query: 559 FTSSAIVDMAFHTRDSV--ADPMAVQGEVLSGLNMPKSIVMRHATPHFQHVFSGDGYSAG 616
           + ++  +D+ +HT       D    + + LS + + + I  R+ + +F H+FSG GYSAG
Sbjct: 597 YMAATKLDLDWHTLSDFEPKDAAKFEADSLSKMGLIEEIAPRYRSTYFSHIFSG-GYSAG 655

Query: 617 YYSYMWSEVLDADAFAAFEETGNAFDGEMARRLKDNIYSVGGSIDPEEAYLAFRGKMPSP 676
           YYSY+WS++L ADAF AF+E G  FD   A   ++N+ S GGS DP   Y  FRGK    
Sbjct: 656 YYSYLWSDILGADAFEAFKENG-IFDKATADAFRNNVLSQGGSEDPMLLYKQFRGKEAGI 714

Query: 677 DAMLLKRGLV 686
           + +L  RGL+
Sbjct: 715 EPLLRSRGLL 724