Pairwise Alignments

Query, 686 a.a., peptidyl-dipeptidase from Agrobacterium fabrum C58

Subject, 742 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella sp. ANA-3

 Score =  550 bits (1416), Expect = e-160
 Identities = 274/669 (40%), Positives = 423/669 (63%), Gaps = 8/669 (1%)

Query: 20  LPKFDAVKDEDFAPAFDAALFSHEQEIDAIAGNPEAPSFENTVTALEIAGDELSRISSLF 79
           +P FD +K E F PAF A +    +EI AI  + + P+F NT+ A+E +GD ++R+S++F
Sbjct: 78  IPAFDKIKPEHFLPAFKAGIAQQHEEIQAIVDSKDKPTFANTIEAMEFSGDLVTRVSNVF 137

Query: 80  WNKAGANTNGVIQALEREIAPKMSRHYSKIGMNEALFKRIDTLWEKREALGLTGEEKRVL 139
           +N  GA+T   +QA+ +E++P +S     I +N+ LF+R+  +++ + +L L   + ++L
Sbjct: 138 FNLTGADTTPELQAISKEVSPMLSSAEDDILLNDKLFQRVKAVYDSKGSLKLNTAQAKLL 197

Query: 140 ERHWKGFVHSGAKLPKERQERLAAINEELAGLGAKFGQNVLADEKSWKLLLSTDEELAGI 199
           E  +K F   GA L ++ + +L A+NEE+  L   FG N+LA+  +++L++    +L+G+
Sbjct: 198 EDTYKSFTRGGANLSEQDKTKLRALNEEIGKLNLAFGDNLLAETNAFELVIDKQADLSGL 257

Query: 200 PGFLRDAMAGAAGEHGEDGKFAVTLSRSIIEPFLTFSERRDLREQAFKAWVARGENGGET 259
           P  +    A  A + G +GK+  T SR  I PFLT+++ R+LRE+ +K ++ RG N    
Sbjct: 258 PADVIATAAETAKKRGHEGKWVFTTSRPSITPFLTYADNRELREKLYKGYIERGNNNNAN 317

Query: 260 DNREIVRRTLELREEKAKLLGYANFAAYKLDDTMAKTPDAVNGLLRQVWEKAVQRAGEEE 319
           DN+ I+ +   LR E+A+L+GY   A + L++  AKTP+ V GLL +VW  A+ +A  E 
Sbjct: 318 DNKVILAKIAALRAERAQLMGYKTHADFVLEERTAKTPENVYGLLNKVWPAALAQAKAEV 377

Query: 320 AGLAAIIAEEGKNHEVLPWDWRHYAEKLRAQKFNFSEAELKPYLQLEKIIEACFDVAERL 379
           A + A+I  +G   ++  WDW +YA+K+R  K++F+E + +PY  L+  ++  F  A RL
Sbjct: 378 ADMQALIDSQGGKFKLQAWDWDYYADKIRVAKYSFNEQQTRPYFSLDSTLKGVFYTANRL 437

Query: 380 FGIHAVEVKGVVGYHPDVRIFEIRDNKGDLKAMFLGDYFARPSKRSGAWMSSFQSQHKLP 439
           +G+   E   +  Y+P+VR +E+ D  G L A+F+GDYF R SKR GAWM+SF+ Q+ + 
Sbjct: 438 YGLTFKERTDLPKYNPEVRTWEVYDKDGKLMAIFMGDYFTRDSKRGGAWMNSFRKQYHM- 496

Query: 440 LKDGTVGEIPIIYNVCNFAKPAEGKPALLSLDDARTLFHEFGHALHGMLSDVTYPSVSGT 499
                V   PII NV N+ +PA  +PALL+ D+A TLFHEFGHALHGMLS+V Y S  GT
Sbjct: 497 ---NGVDSKPIIVNVLNYPRPAGNEPALLTFDEASTLFHEFGHALHGMLSNVEYRSQGGT 553

Query: 500 GVSRDFVELPSQLYEHWLTVPEILEKYALHYETGAPMPKALLDKVLAAQTFNAGFNTVEF 559
            V RD+VE PSQ+ E+W+T PE+L ++A HY+TG  +P+ L+ K+ AA  FN GF TVE+
Sbjct: 554 AVPRDYVEFPSQVNENWMTQPEVLAQFAKHYKTGEVIPQELVKKIQAASKFNQGFATVEY 613

Query: 560 TSSAIVDMAFHTRDSVA--DPMAVQGEVLSGLNMPKSIVMRHATPHFQHVFSGDGYSAGY 617
            ++  +D+ +HT       D    + + L+ + +   I  R+ + +F H+F+G GYSAGY
Sbjct: 614 MAATKLDLDWHTLTDTTPKDAAKFEADSLAAMGLINEISPRYRSTYFSHIFAG-GYSAGY 672

Query: 618 YSYMWSEVLDADAFAAFEETGNAFDGEMARRLKDNIYSVGGSIDPEEAYLAFRGKMPSPD 677
           YSY+WS++L ADAF AF+E G  FD   A   ++NI S GGS DP   Y  FRGK    +
Sbjct: 673 YSYLWSDILGADAFEAFKENG-IFDKATADAFRNNILSKGGSDDPMLMYKNFRGKEAGIE 731

Query: 678 AMLLKRGLV 686
            +L  RGL+
Sbjct: 732 PLLRSRGLL 740