Pairwise Alignments

Query, 204 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 207 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 80.5 bits (197), Expect = 2e-20
 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 18/207 (8%)

Query: 3   IFAFAIV----SPGADLAMVMRQAMVHGRKQAIITSFGVGTSLMFHVTYTILGLGLIISQ 58
           ++ FAIV    SPG    + M   +  G+K++I T  G  ++ +  +  +  GLG IIS 
Sbjct: 8   LYFFAIVLIGISPGPIAMLSMSHGIHFGKKRSIATGLGSVSAALILMAASAAGLGAIISA 67

Query: 59  SIYLFNIVKWLGVAYLIYIGIKALRAGKTELPTAEGGE--DGVRAKSDQTGLKAFTLGFA 116
           S Y F I+KW G AYL+++GIK L        T + G+  + V+ +   T  + F   F 
Sbjct: 68  SEYGFTILKWCGAAYLVFLGIKLLL-------TKQQGQTLEVVKTEGKGTLKQLFKQAFL 120

Query: 117 ANALNPKPVFFFLSIFSTVVHAHTPVGIKFGYGLVMASCLILWFVGVSLFMTTPRMRAAF 176
               NPK + FF ++F   +    P   +    ++  +  ++ F  V ++ +   + A  
Sbjct: 121 VGISNPKDLLFFAALFPQFIDLTAPQLPQL--TILALTWALVDFSFVMIYASMANVLAPS 178

Query: 177 QRAS---QWIDRTSGVVFIALGIKLAT 200
            +AS    W DRTSG VF+ L   L +
Sbjct: 179 LKASNKLHWFDRTSGGVFLTLAAILVS 205