Pairwise Alignments

Query, 315 a.a., site-specific recombinase from Agrobacterium fabrum C58

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas fluorescens FW300-N2E2

 Score =  181 bits (458), Expect = 3e-50
 Identities = 112/300 (37%), Positives = 172/300 (57%), Gaps = 13/300 (4%)

Query: 19  ERQ--SWLATLAGERRLADNTVEAYERDTRQFLRFLTGY-IGRPAAIRDIADLRPVDLRA 75
           ERQ  ++   L  ER+++ +T+ AY RD  + L +     IG  AA+    D++   LR+
Sbjct: 2   ERQLDAYCEHLRSERQVSPHTLSAYRRDLEKVLGWCQKQNIGSWAAL----DIQR--LRS 55

Query: 76  FLANRRKEGAGARSLGRHLAGLRSLLHHLQKKGLVNAAGATAMRAPKQPKSLPKPLTDRQ 135
            +A   ++G  +RSL R L+ +R L H+L ++GL +   AT +  PK  + LPK L   +
Sbjct: 56  LIARLHQQGQSSRSLARLLSAVRGLYHYLNREGLCDHDPATGLAPPKGERRLPKTLDTDR 115

Query: 136 ALKITTAEAQLNEEPWIAARNAAVLSLLYGCGLRISEALGLTPADFPPGTRSLRITGKGN 195
           AL++        E+ ++A R+ A+L L Y  GLR+SE  GL           +++ GKG+
Sbjct: 116 ALQLLEGAV---EDDFLARRDQAMLELFYSSGLRLSELTGLNLDQLDLADGMVQVLGKGS 172

Query: 196 KTRIVPLLAVVTEAVDTYRKLCPYALAADEPMFLGARGGKLQPAIIQREMQKLRGAFGLP 255
           KTR++P+     EA++ +  L   +  AD+ +F+  +G +L P  IQ  + K  G   L 
Sbjct: 173 KTRLLPVGRKAREALEQWLPLRALSNPADDAVFVSQQGRRLGPRAIQLRV-KAAGERELG 231

Query: 256 ENATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDTARLLEIYDNAHPRA 315
           +N  PH LRHSFA+HLL    DLR +QELLGH+ + TTQ+YT +D   L  +YD+AHPRA
Sbjct: 232 QNLHPHMLRHSFASHLLESSQDLRAVQELLGHSDIKTTQIYTHLDFQHLATVYDSAHPRA 291