Pairwise Alignments

Query, 315 a.a., site-specific recombinase from Agrobacterium fabrum C58

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (367), Expect = 9e-40
 Identities = 86/275 (31%), Positives = 149/275 (54%), Gaps = 6/275 (2%)

Query: 42  ERDTRQFLRFLTGYIGRPAAIRDIADLRPVDLRAFLANRRKEGAGARSLGRHLAGLRSLL 101
           +R+ +Q L  +T Y+ +   +     L    +R  +   +++G  A S+   L+ LRS L
Sbjct: 35  QRNYKQQLETMTQYLVQ-VGLTHWTQLDSAWVRQLVMQGKRQGMKASSIATRLSSLRSFL 93

Query: 102 HHLQKKGLVNAAGATAMRAPKQPKSLPKPLTDRQALKITTAEAQLNEEPWIAARNAAVLS 161
             L  +G + A  A  + AP++ ++LPK L   +  ++     ++ ++  ++ R+ A++ 
Sbjct: 94  DFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLL----EVTDDDPLSIRDRAIME 149

Query: 162 LLYGCGLRISEALGLTPADFPPGTRSLRITGKGNKTRIVPLLAVVTEAVDTYRKL-CPYA 220
           L+YG GLR++E + +   D       +R+ GKGNK R V       E V  + KL    A
Sbjct: 150 LMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQEWVGKWLKLRSQLA 209

Query: 221 LAADEPMFLGARGGKLQPAIIQREMQKLRGAFGLPENATPHALRHSFATHLLAGGGDLRT 280
            +A+  +F+   G ++    +Q+ M +      +  + +PH LRHSFATH+L    +LR 
Sbjct: 210 DSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPHKLRHSFATHMLESSNNLRA 269

Query: 281 IQELLGHASLSTTQVYTGVDTARLLEIYDNAHPRA 315
           +QELLGH +++TTQ+YT +D   L ++YD AHPRA
Sbjct: 270 VQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRA 304