Pairwise Alignments

Query, 315 a.a., site-specific recombinase from Agrobacterium fabrum C58

Subject, 307 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score =  126 bits (316), Expect = 8e-34
 Identities = 97/292 (33%), Positives = 146/292 (50%), Gaps = 19/292 (6%)

Query: 30  ERRLADNTVEAYERDTRQFLRFLTGYIGRPAAIRDIADLRPVDLRAFLAN---RRKEGAG 86
           E  L+ N++ AY  D +++  +L    GRP     +A     DL AFLA+   R K  + 
Sbjct: 27  EDGLSPNSLAAYRSDLQRYALWLQQQ-GRPP----LAQAGAADLAAFLADVAARMKSSSQ 81

Query: 87  ARSLGRHLAGLRSLLHHLQKKGLVNAAGATAMRAPKQPKSLPKPLTDRQALKITTAEAQL 146
           AR    +L+ LR     L  +  ++A        P +   LPK +++ Q   +  A    
Sbjct: 82  AR----YLSSLRRFYRRLLAQNRISADPTLQTAMPVKASRLPKVMSEAQVEALLAAP--- 134

Query: 147 NEEPWIAARNAAVLSLLYGCGLRISEALGLTPADFPPGTRSLRITGKGNKTRIVPLLAVV 206
             E  +  R+ A+L  LY  GLR+SE + L   +        R+ GKG+K R+VPL  V 
Sbjct: 135 EIETPLGQRDRAMLETLYATGLRVSELVNLKLHEVSFDMGVARVFGKGSKERLVPLGEVA 194

Query: 207 TEAVDTYRKLCPYALAAD---EPMFLGARGGKLQPAIIQREMQKLRGAFGL-PENATPHA 262
            + + +Y      AL  +   + +F+ ARG  +   +    ++K     G+ P   +PH 
Sbjct: 195 LDWLKSYLNDGRNALLDNRLSDFLFVTARGTAMTRQMFWTLVKKYALVAGMDPARLSPHV 254

Query: 263 LRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDTARLLEIYDNAHPR 314
           LRH+FATHLL  G DLR +Q LLGHA +STTQ+YT V   RL +++   HPR
Sbjct: 255 LRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKDLHAVHHPR 306