Pairwise Alignments

Query, 509 a.a., ATP synthase alpha chain from Agrobacterium fabrum C58

Subject, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  560 bits (1443), Expect = e-164
 Identities = 288/515 (55%), Positives = 376/515 (73%), Gaps = 19/515 (3%)

Query: 1   MDIRAAEISAILKDQIKNFGNEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIR 60
           M + + EIS ++K +I++F   +E    G ++SV DGI R++GL +V  GEM+E PG   
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRY 60

Query: 61  GMALNLEADNVGVVIFGSDRSIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGP 120
            +ALNLE D+VG V+ G    ++EG  V  TG I++VPVGPELLGRVV+ LG PIDGKGP
Sbjct: 61  ALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGP 120

Query: 121 INAAKRSRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
           I A + S V+V APG+I RKSV +P+ TG K++D++IP+GRGQREL+IGDRQTGKTA+ +
Sbjct: 121 IGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAI 180

Query: 181 DTILNQKAIHDNGPDGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAATASDPA 240
           D I+NQK           +Y +YVAIGQK ST+A  V+ LEE GAL+ +I+V A+AS+ A
Sbjct: 181 DAIINQK--------NSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESA 232

Query: 241 PMQYLAPFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300
            +QYLAP++GCAMGEYFRD G+ ALI YDDLSKQAVAYRQ+SLLLRRPPGREA+PGDVFY
Sbjct: 233 ALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFY 292

Query: 301 LHSRLLERAAKLSDEM-----------GAGSLTALPVIETQGNDVSAFIPTNVISITDGQ 349
           LHSRLLERAA++++E              GSLTALP+IETQ  DVSAF+PTNVISITDGQ
Sbjct: 293 LHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQ 352

Query: 350 IFLETDLFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYREMAAFAQFGSD 409
           IFL+T+LF  G+RPAV+ G+SVSRVG AAQ K +K+++G I+  LA YRE+AAFAQF SD
Sbjct: 353 IFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSSD 412

Query: 410 LDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKIPVAQVGKFEQGFL 469
           LD +T+R L  G ++TEL+KQ Q++P+   +Q  VIFA   GYL  + + +V  FE   L
Sbjct: 413 LDEATKRQLTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAALL 472

Query: 470 SYLRSEGKAILDTIRTEKAISDDTKGKLKGALDNF 504
           SY R+    +   I    A +D+ + +LK  +D+F
Sbjct: 473 SYARAHYAELAAQIDKTGAYNDEIEAQLKKLVDDF 507