Pairwise Alignments

Query, 159 a.a., chemotaxis protein from Agrobacterium fabrum C58

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 15  LEIIAFRLHDQEFCVKTTTIREI-RGWAPSTPIPHAPKDVIGVMNLRGSVIPIIDLAHKL 73
           ++++ F+L  +EF +   T++EI R     + +P     + GV+NLRG+V+PI+D+  + 
Sbjct: 369 MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRF 428

Query: 74  GMKSTVANERSAIVVAEVHNMVIGMLVDRVSDILTIPANQVQPVPEIS 121
            +     +ER  I+V     +  G +VD VS++L IP +Q++  P +S
Sbjct: 429 HLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLS 476



 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 37/142 (26%), Positives = 67/142 (47%)

Query: 16  EIIAFRLHDQEFCVKTTTIREIRGWAPSTPIPHAPKDVIGVMNLRGSVIPIIDLAHKLGM 75
           + + F L D+ F +    + EI     +  +P  P  +IG+ NLRG ++P++ L   L M
Sbjct: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78

Query: 76  KSTVANERSAIVVAEVHNMVIGMLVDRVSDILTIPANQVQPVPEISASFDKSYSEGIIAN 135
             T A E + ++V  +    IG  VDRV ++ T     ++P        D +     I +
Sbjct: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138

Query: 136 EHGMICFLNLAKMFKGTEAEDL 157
           ++ +I  LN  ++   +  E+L
Sbjct: 139 DNQIIQVLNCHRLLDNSVEEEL 160



 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 13/122 (10%)

Query: 19  AFRLHDQEFCVKTTTIREIRGWAPSTPIPHAPKDVIGVMNLRGSVIPIIDLAHKLGMKST 78
           AF L D +  V+   I         T +P     ++GV+NLRG  +P++ L    G+ S 
Sbjct: 204 AFPLEDTQEIVRIPEI--------ITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSI 255

Query: 79  VANERSAIVV-----AEVHNMVIGMLVDRVSDILTIPANQVQPVPEISASFDKSYSEGII 133
             ++   ++V     +E   + +G++VD V +++ +  + +  VPEI +   ++     I
Sbjct: 256 SFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDISAI 315

Query: 134 AN 135
            N
Sbjct: 316 CN 317