Pairwise Alignments

Query, 308 a.a., transcriptional regulator, ROK family from Agrobacterium fabrum C58

Subject, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 46/235 (19%), Positives = 104/235 (44%), Gaps = 21/235 (8%)

Query: 57  VSLSIAGVIDPDTGKATVANIPSIHGRVLKDELEKALNLPVIVSNDADCFVIAESEIGSG 116
           + +++ G+++P+TG        +I+   L   +    ++   V ND     +AE   G+ 
Sbjct: 147 IGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFHVECFVGNDVRGIALAEHYFGAS 206

Query: 117 QGHRVVFGVILGTGVGGGLVIDGKLINSHGGFAGEWGHGPVAATSAGNPPVSLPRFECGC 176
           Q  +    V +  G G G++++G++   +    GE GH  +               +C C
Sbjct: 207 QDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGE----------QCQC 256

Query: 177 GLTGCVDAIGS----ARGMEKLHAHLHRQEM------TSEDIIAAWQAGDAKAARTIDVL 226
           G  GC++ + +       ++KL A  +   +      T +D+     AGD  A + +  +
Sbjct: 257 GNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANAGDELAKQALVRV 316

Query: 227 IDILASPLAMVINVTGATIVPVGGGLSNSRELL-AALDEAVRGRILRRFNRPLVV 280
            + L   +A+ +N+     + + G ++ ++E++  A+   V  + L+ F++ L +
Sbjct: 317 GNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKTFHQHLPI 371