Pairwise Alignments

Query, 294 a.a., ABC transporter, membrane spanning protein (maltose) from Agrobacterium fabrum C58

Subject, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (291), Expect = 1e-30
 Identities = 74/258 (28%), Positives = 133/258 (51%), Gaps = 19/258 (7%)

Query: 50  VGFINYEKIFN-----ATFADVITRTFVWTFFSVSIKMIIG-TFGAVLLNSAVPGRALFR 103
           +G  N+E+++        F ++   T +++  +V   ++IG    +V+   A+ GRA++R
Sbjct: 269 IGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVYR 328

Query: 104 ILTMPPWIVPMAIGIFMWGWMYNGQFGMISGVLQNLGLVDGPVAFLAYGRTAFWATIVTD 163
           +L + P+ VP  I I ++  ++N  FG I+ VL   GL     A+ +    A    ++ +
Sbjct: 329 VLLILPYAVPAFISILIFRGLFNQSFGEINMVLN--GLFGLSPAWFSDPLLAKTMVLIVN 386

Query: 164 VWIGVPMVTLYLLAAIQSIPQDLYEAAWTDGASRSYRFRRITLPLMLPAMITMSVLSLIS 223
            W+G P + +  +  +++IP DLYEA+  DGA+  + F +ITLP+M+  +  + + S   
Sbjct: 387 TWLGFPYMMILCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIKPLTPLLIASFAF 446

Query: 224 TFNSFDIIWILTRGGPN--------GETTTMIIDTYKTAI---GAYKYGEGAARAVLICI 272
            FN+F +I +LT+GGPN        G T  ++  TY+ A    G   +G  +A A LI +
Sbjct: 447 NFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIATLIFL 506

Query: 273 FLSIFTFFYFRITRRFSQ 290
            +        R T+   Q
Sbjct: 507 LVGALALLNLRFTKLSQQ 524