Pairwise Alignments

Query, 285 a.a., ABC transporter, membrane spanning protein (maltose) from Agrobacterium fabrum C58

Subject, 293 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  133 bits (335), Expect = 4e-36
 Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 7/272 (2%)

Query: 17  VGIYCGIAVFLAFVLAPFVEGFLVSLKPLS-LLFSSPYRFWPENGSFEAYRTMWVSVPGF 75
           V IY  + +FL  +L PF    + + KP + LL  S   FW    +   ++ +      +
Sbjct: 25  VTIYIPLLIFLFVLLFPFYWMVITAFKPDNELLSQSGNPFWVIAPTLAHFKKLLFDTQ-Y 83

Query: 76  ALYIFNSFFIAGSITLIVLVLVIPASYAFARFEFRGAGLL-LGIFLAVKMFSGAVLLIPL 134
             ++ N+  ++   T   L   + A+YA  R  F+G+  + LGIFLA  +   ++L IPL
Sbjct: 84  PAWLLNTVIVSVVSTFASLAASVFAAYAIERLRFQGSKQVGLGIFLAY-LIPPSILFIPL 142

Query: 135 FRLMRSIGVLNTYFAMIIPGVAFIIPTGILLLVTYMRRIPRELEEAAYVDGASRLYTLRR 194
             ++  +G+ +T +A+I+    F+IP    LL+ Y R IP ELEE A +DGA+R   L +
Sbjct: 143 AAIVFKLGLFDTRWALILTYPTFLIPFCTWLLMGYFRSIPYELEECALIDGATRWEILVK 202

Query: 195 VVLPIATPGIAVVAISSFIEAYAQQFIYALTFNSKTEYMPLPVGLFAYFGRQEVV-WNEL 253
           ++LP+A PG+    I +F  ++  +FIYALTF S +E   +PVG+       +V  W  L
Sbjct: 203 IILPLAVPGLISAGIFAFTLSW-NEFIYALTFISSSEVKTVPVGIVTELVEGDVYHWGAL 261

Query: 254 MAASFVGIAPAMIAIFLMQRYLVGGLTAGAVK 285
           MA + +G  P  +       Y V G+T GAVK
Sbjct: 262 MAGALLGSLPVAVVYSFFVEYYVSGMT-GAVK 292