Pairwise Alignments

Query, 410 a.a., ABC transporter, substrate binding protein (maltose) from Agrobacterium fabrum C58

Subject, 448 a.a., Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B from Xanthomonas campestris pv. campestris strain 8004

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 86/374 (22%), Positives = 150/374 (40%), Gaps = 25/374 (6%)

Query: 50  IKEWEGKNAGWKVVPEVVGWEQCQDKATTLAAAGTPVSMAYVGSRTLKQFAQNDLIVPVP 109
           + E+E +N G KV  + +      +K  T  AA     +  +G+  L +FA  D + P+ 
Sbjct: 46  VDEFERQNPGIKVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQ 105

Query: 110 -----MTEDEKKTYYPNIVDTVTFEDTQWGVPVAFSTKALYWNKDLFKQAGLDPETPPKT 164
                 +  + K Y+P + DT   + T +GVP    T+ L++ KDL ++AG      PKT
Sbjct: 106 PYVARSSIVDPKDYFPGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGY--TEMPKT 163

Query: 165 WAEEIAFAKQIKEKTGIAGYG--LPAKTFDNTMHQFMHWVYTNNGKVIDGDKITVDSPQV 222
           WAE       IK   G   Y   +P   F+    Q    +  ++  + D D       + 
Sbjct: 164 WAEMEQVMAAIKRHVGPDRYAILMPLNEFE---QQLSFALQQDDRLLRDHDNYGNFRGEG 220

Query: 223 LAALKAYKDITPYSVEGPTAYEQNEIRAI---FLDGKVGMIQAGSGAATRLQ-----ATK 274
                 + D T Y         + ++  +   F +G      +G       +       +
Sbjct: 221 FRKALGFYD-TMYQKGWAPKVSETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGME 279

Query: 275 INWGIATLPLGPEAKGPGTLLITDSLAIFKGTGVEEKATEFAKFITSPGPQGEYELQGGA 334
             WG A LP GP   G G +    SL IFK +  ++ A +  ++++ P  Q  +    G 
Sbjct: 280 GKWGTAPLP-GPNGLGAG-IAGGSSLVIFKSSQHKDAAWKLIEYLSQPTVQARFHAIIG- 336

Query: 335 GLTPLRPSPKVDEFIAKDPFWKPLIDGIAYGGPEPLFTDYKGFQDVMIEMVQSVVTGKAT 394
            L P R + K+   +A D       D +      P   +++     M  + + VV G  +
Sbjct: 337 DLPPRRSTWKLPS-LANDELAHAFGDQLERVKATPKVLEWERIVQEMRLVTERVVRGGQS 395

Query: 395 PEDAAKKASAALEQ 408
            EDA ++    +++
Sbjct: 396 HEDAVQELDKRVDE 409