Pairwise Alignments

Query, 391 a.a., ABC transporter, membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 303 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (404), Expect = 6e-44
 Identities = 93/232 (40%), Positives = 140/232 (60%), Gaps = 10/232 (4%)

Query: 160 EGGEM-FLLGTDRLGRDVLSRIIYGARISLTIGLLGVAMSFVLGIVIGGLAGYRGGTFDL 218
           EGG++ FLLGTD LGRD+LSR+I G+R+SL IGL  V MS + GI++G  AG+       
Sbjct: 74  EGGQIQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRILGP 133

Query: 219 IVQRIIEVLQSIPSIPLWLALAAIMPVTWSPILVYLGITIILGMLDWTGLARAVRSKLLA 278
            + R+++++ ++PS+ L +A+ AI+     P L+     I + ++      R  R+ ++ 
Sbjct: 134 TIMRLMDIMLALPSLLLAVAIVAIL----GPGLI--NTVIAIAIVSLPSYVRLTRAAVMG 187

Query: 279 LREEDYVLSAQLMGAGTPRIIGRHLIPGFMSHLIASATLTIPGMILGETALSFLGLGLRP 338
               DYV +A+L GAG PR++   ++P  M+ LI  ATL+    IL   AL FLGLG++P
Sbjct: 188 ELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQP 247

Query: 339 PITSWGILLTEARSVSVIALYPWLL-IPTIPVVLVILAFNFFGDGLRDAADP 389
           P   WG +L  AR    I    W++ +P + ++L +LA N  GDGLRDA DP
Sbjct: 248 PTPEWGTMLASAR--DYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDP 297