Pairwise Alignments

Query, 391 a.a., ABC transporter, membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  175 bits (444), Expect = 1e-48
 Identities = 94/226 (41%), Positives = 140/226 (61%), Gaps = 9/226 (3%)

Query: 165 FLLGTDRLGRDVLSRIIYGARISLTIGLLGVAMSFVLGIVIGGLAGYRGGTFDLIVQRII 224
           F  GTD  GRDV +RI+YGA+ISLT+G++   ++ ++G+ +G  AGY GG +D +V    
Sbjct: 49  FWFGTDGQGRDVYTRILYGAQISLTVGIVSQVINSIIGVTLGMTAGYWGGWWDDLVNGFT 108

Query: 225 EVLQSIPSIPLWLALAAIMPVTWSPILVYLGITIILGMLDWTGLARAVRSKLLALREEDY 284
            V+ +IPS+   LA+ A++      +L+ LG+T      +W+   R  RS  L+L+   Y
Sbjct: 109 NVMLAIPSLIFALAVMAVLGPGLPSLLIALGLT------NWSWTCRIARSSTLSLKSLGY 162

Query: 285 VLSAQLMGAGTPRIIGRHLIPGFMSHLIASATLTIPGMILGETALSFLGLGLRPPITSWG 344
           V +AQ +G G  RI+   ++P  M  ++  ATL +   +L E ALSFLGLG++PP  SWG
Sbjct: 163 VQAAQTLGYGDLRIMFTQILPNMMGPILVMATLGMGSAVLSEAALSFLGLGIQPPFPSWG 222

Query: 345 ILLTEARSVSVIALYPWLLI-PTIPVVLVILAFNFFGDGLRDAADP 389
            +LT+AR   +I L PW+ I P + + L +L FN  GDGLRD+ DP
Sbjct: 223 SMLTDAR--QLIQLAPWVAIFPGLAIFLSVLGFNLLGDGLRDSLDP 266