Pairwise Alignments

Query, 332 a.a., ABC transporter, membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 334 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  135 bits (340), Expect = 1e-36
 Identities = 96/339 (28%), Positives = 171/339 (50%), Gaps = 20/339 (5%)

Query: 1   MLRYIIKRILVMIPTLILISMLVFTIIELPPGDYFESYVAELRAMGETANLAEIEELRTR 60
           M R+++ R+ V+IPT I +S++ F+ I L PGD       E R M    +     E+  +
Sbjct: 1   MFRFLLGRLAVLIPTFIGVSIIAFSFIRLLPGDPVALLSGE-RVMSPERHA----EISHQ 55

Query: 61  YGFDQPAPIRYFRWATGMLVGDFGYSFEYQLPVSDVVGDRLWLTVLVSFVTIIVTWILAF 120
            GFD+P  ++Y  +  G+L GDFG S   + PV D   +    TV +S   II   ++  
Sbjct: 56  LGFDRPIVMQYLDYLWGVLQGDFGTSIVTKKPVIDQFMELFPATVELSLCAIIFAVVVGI 115

Query: 121 PIGIYSATHKYSWGDYGLTFLGLLGIAIPNFMLALILMYFAN--------------IWFG 166
           P G+ +A  + S  D  +    L+G ++P F   L+L+   +              ++F 
Sbjct: 116 PAGVVAAVKRGSIFDQIIMGTALIGFSMPIFWWGLLLIIVVSGILQWTPVSGRISLMFFF 175

Query: 167 ISIGHLMDREYLNQAMSWAKFKSILEHIWIPVLIIGTAGTAGMIRRLRANLLDELQKQYV 226
            S+   M  + L      A F+S   H+ +P +++GT   A + R+ R+ +L+ L + YV
Sbjct: 176 PSVTGFMLVDSLLSGQEGA-FQSAFNHLILPTIVLGTIPLAVIARQTRSAMLEVLSEDYV 234

Query: 227 VTARAKGLHPFKVLIKYPLRMALNFFISDIGSILPAIISGAEITAVVLSLETTGPMLIRA 286
            TARAKGL  F+V+  + LR A+   ++ IG  +  +++GA +T  + S    G  ++ +
Sbjct: 235 RTARAKGLSTFRVVGIHALRNAMIPVVTTIGLQIGVMLAGAILTETIFSWPGIGKWMVDS 294

Query: 287 LQSQDMYLAGSFLMFLAFLTVIGVLVSDIALAILDPRIR 325
           +  +D  +    L+ +A + ++  L  D+   +++PRIR
Sbjct: 295 VFRRDYAVIQGGLLIIAAVIMLVNLAVDLLYGLINPRIR 333