Pairwise Alignments

Query, 633 a.a., ABC transporter, substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 100/431 (23%), Positives = 160/431 (37%), Gaps = 109/431 (25%)

Query: 82  MPISNYAR-----LVGYDEKFELHPDILESYEVQEERIFTFKLREGHKWSDGSDFTSEDF 136
           +P SN  R     LV  D    + P + ES+E  + + FTF +R+  KWS+G   T+ DF
Sbjct: 61  VPESNVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDF 120

Query: 137 RYFWE---------DVALNKEIHKGGPPIELLVNNNPPL---IEVVDRLTVRYTWEGPNP 184
            Y ++           +   E  K     E++           + VD  T+ +  E   P
Sbjct: 121 VYSFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVP 180

Query: 185 DFLAKLAAASPARLFLPAAYMKQFHVKYQTAENLAKLIKKNKADDWSGLHIKMSRQVRPE 244
            F+  +                     + T + + K   +   D W+          +PE
Sbjct: 181 YFVMMMG--------------------HTTVKPIHKATVEKFGDQWT----------KPE 210

Query: 245 N---PALPTLDAWRNTTSPPAEQFVFERNPYYHRVDENGL-----------QLPYLDRFL 290
           N        LD W        E+   +RNP Y   D+N +           Q+  ++RFL
Sbjct: 211 NFVGNGAYVLDKW-----VVNERLELKRNPQYWD-DKNTVLNKVTYLPIENQVAEMNRFL 264

Query: 291 LNVTSSDIISAKTASGDSDLQYFGLDFADYTFLKDAEKRFPLKVNLYKRSQGSRIALLPN 350
               S +I      + +  L++F          K  +K  P  V +    QG        
Sbjct: 265 ----SGEI----QITNELPLEHF----------KRLKKEHPESVQV----QGQLCTYYYG 302

Query: 351 LNCADPVWRTAFQDVRVRRALSLAINRHEINMVCF-------YGLAKESADTVLPESPLY 403
            N   P     F DVRVR+ALS AI+R  ++           Y L  E      PE P Y
Sbjct: 303 FNNKKP----PFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAY 358

Query: 404 RQEFADAWSAFDR-AAANRLLDEAGFDKRDNAGLRLLPDGRPAYIIVETTGESTLETDV- 461
            +      +  +R A A +LL+EAG++K +     LL +    +  + T  +S  +T + 
Sbjct: 359 GK-----MTQKERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLG 413

Query: 462 --MELVTDHWR 470
             + L    W+
Sbjct: 414 VDIALENQEWK 424