Pairwise Alignments

Query, 633 a.a., ABC transporter, substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 61.2 bits (147), Expect = 1e-13
 Identities = 87/406 (21%), Positives = 164/406 (40%), Gaps = 72/406 (17%)

Query: 103 ILESYEVQEERI-FTFKLREGHKWSDGSDFTSEDFRYFWEDVALNKEIHKGGPPIELLVN 161
           + ESY++ ++ +  TF +R+G KWSDG  FT++D  Y +  +    E+ + G      +N
Sbjct: 79  LAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRG------IN 132

Query: 162 NNPPLIEVVDRLTVRYTWEGPNPDFLAKLAAASPARLFLPAAYMKQFHVKYQTAENLAKL 221
                +E VD   VR+     N +                        V Y+ +  L  +
Sbjct: 133 KWVTSVEKVDEYKVRFRLSEANSN------------------------VPYEIS--LIPI 166

Query: 222 IKKNKADDWSGLHIKMSRQVRPENPALPTLDAWRNTTSPPAEQFVFERNPYYHRVDENGL 281
           + ++   D     +K       ENP         +T +P  + ++  RNP Y   D   L
Sbjct: 167 VAEHVWKD-----VKDPTTFTNENPVGTGPFTVIDTFTP--QLYIQCRNPNYW--DAANL 217

Query: 282 QLPYLDRFLLNVTSSDIISAKTASGDSDLQYFGLDFADYTFLKDAEKRFPLKV--NLYKR 339
           ++  L   +  + ++D +  K  + +       LD+   +F+ D ++ +      + Y  
Sbjct: 218 EVDCLR--VPQIANNDQLLGKIVNSE-------LDWTS-SFVPDIDRTYAAANPNHHYWY 267

Query: 340 SQGSRIALLPNLNCADPVWRTAFQDVRVRRALSLAINRHEINMVCFYGLAKESADTVLPE 399
                 A + N    DP  + A  +V  RRA S+A++R  I  + FYG     + TV   
Sbjct: 268 PAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYG-----SGTVNDF 322

Query: 400 SPLYRQEFADAWS------------AFDRAAANRLLDEAGFDKRDNAGLRLLPDGRPAYI 447
           +      F +AWS             +D   + +LL +AGF   +  G    P G+   +
Sbjct: 323 ASGLGYAF-EAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFEL 381

Query: 448 IVETTGESTLETDVMELVTDHWRHIGIAVSVRPTQRDVFRKRAMGG 493
           ++++    T   + ++L  +  + +GI    R  +  V+ +  + G
Sbjct: 382 LIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLEG 427