Pairwise Alignments

Query, 633 a.a., ABC transporter, substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 102/420 (24%), Positives = 165/420 (39%), Gaps = 84/420 (20%)

Query: 98  ELHPDILESYEVQEE-RIFTFKLREGHKWSDGSDFTSEDFRYFWEDVALNKEIHKGGPPI 156
           EL PD+ ESYE+ E+ +IFTFKLR+G K+ +G + T++D +Y  E V +N      G   
Sbjct: 71  ELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIERV-VNPATQSPGAGF 129

Query: 157 ELLVNNNPPL----------IEVVDRLTVRYTWEGPNPDFLAKLAAASPARLFLPAAYMK 206
              +                I V D  T+R+    P+  FL                   
Sbjct: 130 FATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFL------------------- 170

Query: 207 QFHVKYQTAENLAKLIKKNKADDWSGLHIKMSRQVRPENPALPTLDAWRNTTSPPAEQFV 266
             HV    A N A ++ K + +       K      P       L  W        ++ V
Sbjct: 171 --HV---MALNFAHVVPKEEVEKHGADFGK-----NPVGSGAFKLAEW-----TLGQRLV 215

Query: 267 FERNPYYHRVDENGLQLPYLDRFLLNVTSSDIIS-AKTASGDSDLQYFGLDFADYTFLKD 325
           FER   Y         LP LDR    V    +++  +  +G+ D+   G+  A +  + +
Sbjct: 216 FERFTDYWNEG-----LPKLDRITFEVGQEPVVALLRLQNGEIDVPGDGIPPAKFVEVTN 270

Query: 326 AEKRFPLKVNLYKRSQGSRIALLPNLNCADPVWRTAFQDVRVRRALSLAINRHEINMVCF 385
                  K  + +  Q     +  N+  A       F  V VR+A+++AIN+  I  +  
Sbjct: 271 DPN---FKDLIIRGGQLHTGYVTMNVKMA------PFDKVEVRKAVNMAINKDRILRI-I 320

Query: 386 YGLAKESADTVLPESPLYRQEFADAWSAFDRAAANRLLDEAGFDKRDNAGLRLLPDGRPA 445
            G A  +   + P  P Y +++A    A+D   A +LL++AG           L DG   
Sbjct: 321 NGRAVAANQPLPPSMPGYAKDYAG--YAYDPEGAKKLLEQAG-----------LGDGFST 367

Query: 446 YIIVETTGESTLETDVMELVTDHWRHIGIAVSVRP-TQRDVFRKRAMGGEVLMS--VWMG 502
            + V  T     +  + + +    + IGI  S++   Q +V    A GGE   +  +W G
Sbjct: 368 ELYVMNTDP---QPRIAQAIQQDLKAIGITASIKSLAQANVI---AAGGEENQAPMIWSG 421