Pairwise Alignments

Query, 630 a.a., ABC transporter, nucleotide binding/ATPase protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  374 bits (959), Expect = e-108
 Identities = 221/549 (40%), Positives = 324/549 (59%), Gaps = 47/549 (8%)

Query: 27  VRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPKTARV-NGRVLFTDPENAAAGPID 85
           V+  S  + PG++  +VGESGSGK++  + ++ + P T +V +G V +           D
Sbjct: 24  VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGR--------D 75

Query: 86  LLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPLHTIGNQIDEALRIHSILSPAERAEKMY 145
           +L++ ++  E+R +RG  IG++FQEPMTS +P  TIG Q++E L +H+  S  ER   + 
Sbjct: 76  VLKMKEN--ELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLIL 133

Query: 146 ETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIAMALICRPALLIADEPTTALDVTIQAQI 205
           + L  VG   P+  ++ YP E SGGMRQR M+A  ++ +PALLIADEPTTALD  IQ  +
Sbjct: 134 DMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDV 193

Query: 206 LKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIYQGEIMEAGTVDDIFKAPGHPYLKG 265
           ++L+ +L      ++LLI+HDL +VA     + V+ +G I+E G  +D+ KAP HPY K 
Sbjct: 194 MELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKK 253

Query: 266 LMAAVPHFDMKPGERLKALREIKVDHESLVGKKTAAVNKTPGPLLTVDNISKTFTTRKSS 325
           L++++P F  +P +                      ++ T  P+++  +I   +  RK S
Sbjct: 254 LLSSLP-FRGRPRQ----------------------IDLTSVPMISARDIIVDYAGRK-S 289

Query: 326 WFRKSDANATKAVNSVSFEICRGECLGLVGESGSGKTTVSKILMRAVRPDEGSITFH-RP 384
            FRK+     +A++ VS +I  GE + LVG SGSGKTT+ + +   V   EG I F  RP
Sbjct: 290 LFRKN--KPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP 347

Query: 385 EGDIDVLNAKDGDLKELRSKIQMVFQDPISSLSPRMTVGNILSEPLEIHGRGDAKYRAEK 444
             +         +  + R   QMVFQDP SSL PRMT+  ++ E L      D K + ++
Sbjct: 348 RTE---------NWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKR 398

Query: 445 VRGLVRAIGLGESALNRYPHSFSGGQRQRIGIARALALGPELLICDEPVSALDVSVQAQI 504
               +  +GLG     RYPH  SGGQRQR+ IARA+A  P  LI DEPVSALDV+V+AQ+
Sbjct: 399 TLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQV 458

Query: 505 LNLLKDLQQDLGLTYLFISHNLAVVDYMADRVAVMCEGRIVELAPREILMRSPIHPYTKS 564
           L+L  DLQ+  G + LFISH+L VV+ +ADRV VM +GRI+E   R+ +  SP   YT+ 
Sbjct: 459 LDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRR 518

Query: 565 LLAAVPFPD 573
           LL+A+P  D
Sbjct: 519 LLSAIPALD 527



 Score =  191 bits (486), Expect = 5e-53
 Identities = 113/302 (37%), Positives = 176/302 (58%), Gaps = 18/302 (5%)

Query: 336 KAVNSVSFEICRGECLGLVGESGSGKTTVSKILMRAVRPD----EGSITFHRPEGDIDVL 391
           + V SVSF++  GE  G+VGESGSGKT  ++ L+  + P     +GS+++       DVL
Sbjct: 22  QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGR----DVL 77

Query: 392 NAKDGDLKELR-SKIQMVFQDPISSLSPRMTVGNILSEPLEIHGRGDAKYRAEKVRGLVR 450
             K+ +L+ LR ++I +VFQ+P++SL+P MT+G  L E L +H +  A+ R   +  +++
Sbjct: 78  KMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLK 137

Query: 451 AIGLG--ESALNRYPHSFSGGQRQRIGIARALALGPELLICDEPVSALDVSVQAQILNLL 508
            +G+   E AL+ YPH FSGG RQRI +A  + L P LLI DEP +ALD  +Q  ++ L+
Sbjct: 138 RVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELM 197

Query: 509 KDLQQDLGLTYLFISHNLAVVDYMADRVAVMCEGRIVELAPREILMRSPIHPYTKSLLAA 568
            +L +  G   L ISH+L +V     R+ VM +G IVE    E L+++P HPYTK LL++
Sbjct: 198 VELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSS 257

Query: 569 VPFPDLDRPLDFRTIGKISA-------TGKFDWGKQFRDEGDCEMISADLGEGHFVLANG 621
           +PF    R +D  ++  ISA        G+    ++ + +     +S D+ EG  V   G
Sbjct: 258 LPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVG 317

Query: 622 NA 623
            +
Sbjct: 318 GS 319



 Score =  158 bits (400), Expect = 5e-43
 Identities = 103/259 (39%), Positives = 138/259 (53%), Gaps = 22/259 (8%)

Query: 26  AVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPKTARVNGRVLFTDPENAAAGPID 85
           A+   S+ I  G+V ALVG SGSGK+ +G+TI G+        GR+ F            
Sbjct: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL---VTESEGRIQFQGRPRT------ 349

Query: 86  LLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPLHTIGNQIDEALRIHSILSPAERAEKMY 145
                ++  + R        ++FQ+P +S  P  TI   ++EALR    L    + ++  
Sbjct: 350 -----ENWTDYRL----NCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTL 400

Query: 146 ETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIAMALICRPALLIADEPTTALDVTIQAQI 205
           ETL+ VG          YP ELSGG RQR  IA A+  RP  LIADEP +ALDVT++AQ+
Sbjct: 401 ETLEEVGLG--VDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQV 458

Query: 206 LKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIYQGEIMEAGTVDDIFKAPGHPYLKG 265
           L L  DLQ R   S L I+HDLGVV  +AD V V+  G I+E G  D IF +P   Y + 
Sbjct: 459 LDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRR 518

Query: 266 LMAAVPHFDM--KPGERLK 282
           L++A+P  D   K G  LK
Sbjct: 519 LLSAIPALDQNEKGGVTLK 537