Pairwise Alignments

Query, 630 a.a., ABC transporter, nucleotide binding/ATPase protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  419 bits (1078), Expect = e-121
 Identities = 245/569 (43%), Positives = 341/569 (59%), Gaps = 41/569 (7%)

Query: 7   LLRIENLRVSFSLMGGTIDAVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIH--PKT 64
           +LRI+ L V F   G  + AV D S  + PG+   ++GESGSGKSV   T+MG+   P  
Sbjct: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67

Query: 65  ARVNGRVLFTDPENAAAGPIDLLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPLHTIGNQ 124
             V+G ++F           DL +L  +GR  R + G RI +IFQ+P+   +P++T+G Q
Sbjct: 68  DIVSGSLVFDGT--------DLSRLDDEGR--RELNGRRIAMIFQDPLAYLNPVYTVGRQ 117

Query: 125 IDEALRIHSILSPAERAEKMYETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIAMALICR 184
           I E    H         +K+   L+ VG  +  + ++ YP + SGG RQR MIAMA+  +
Sbjct: 118 IAEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALK 177

Query: 185 PALLIADEPTTALDVTIQAQILKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIYQGE 244
           P +LIADEPTTALDV++QAQIL+LLRDLQ    M++++ITHDL V A +AD + V+  G+
Sbjct: 178 PDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGK 237

Query: 245 IMEAGTVDDIFKAPGHPYLKGLMAAVPHFDMKPGERLKALREIKVDHESLVGKKTAAVNK 304
           ++E+G  +D+F  P H Y + LM+AVPH D     R  A  E+                 
Sbjct: 238 VVESGKAEDVFTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEV----------------- 280

Query: 305 TPGPLLTVDNISKTFTTRKSSWFRKSDANATKAVNSVSFEICRGECLGLVGESGSGKTTV 364
               LL V ++SK +      +  K +    +AV+ VSF + RGE +G+VGESGSGK+++
Sbjct: 281 ----LLQVAHLSKHYKLGSGPFSPKRE---FRAVDDVSFTLRRGETVGIVGESGSGKSSI 333

Query: 365 SKILMRAVRPDEGSITFHRPEGDIDVLNAKDGDLKELRSKIQMVFQDPISSLSPRMTVGN 424
           +++L+R   P  G+  F       D+   K   L   R ++QMVFQDP  S++PRM V +
Sbjct: 334 ARMLLRLNEPTSGAALF----AGEDIFELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRS 389

Query: 425 ILSEPLEIHGRGDAKYR-AEKVRGLVRAIGLGESALNRYPHSFSGGQRQRIGIARALALG 483
           I+SEP  IH     + R  E+V  L+  +GL      R+PH FSGGQRQRI IARALA  
Sbjct: 390 IISEPWAIHRDILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASE 449

Query: 484 PELLICDEPVSALDVSVQAQILNLLKDLQQDLGLTYLFISHNLAVVDYMADRVAVMCEGR 543
           PEL++CDE VSALDVS+Q Q++ LL DL+Q LGL+Y+FI+H+L +V   ADR+ VM  GR
Sbjct: 450 PELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGR 509

Query: 544 IVELAPREILMRSPIHPYTKSLLAAVPFP 572
           IVE    E L  SP H YT++LL AVP P
Sbjct: 510 IVEEGETEALFVSPQHEYTQALLRAVPQP 538



 Score =  197 bits (501), Expect = 1e-54
 Identities = 113/276 (40%), Positives = 167/276 (60%), Gaps = 13/276 (4%)

Query: 302 VNKTPGPLLTVDNISKTFTTRKSSWFRKSDANATKAVNSVSFEICRGECLGLVGESGSGK 361
           +N    P+L +D ++  F          S+ +  +AV+ VSF++C GE L ++GESGSGK
Sbjct: 1   MNAPDKPILRIDKLTVDFL---------SEGDPVRAVDDVSFDVCPGETLVILGESGSGK 51

Query: 362 TTVSKILMRAVRPDEGSITFHRPEGD-IDVLNAKDGDLKELRSK-IQMVFQDPISSLSPR 419
           +  +  +M  +    G I       D  D+    D   +EL  + I M+FQDP++ L+P 
Sbjct: 52  SVSTGTVMGLIDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPV 111

Query: 420 MTVGNILSEPLEIHGRGDAKYRAEKVRGLVRAIGLGES--ALNRYPHSFSGGQRQRIGIA 477
            TVG  ++E  E HG G+     +KV  L+  +G+ E+   ++ YPH FSGGQRQR+ IA
Sbjct: 112 YTVGRQIAEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIA 171

Query: 478 RALALGPELLICDEPVSALDVSVQAQILNLLKDLQQDLGLTYLFISHNLAVVDYMADRVA 537
            A+AL P++LI DEP +ALDVSVQAQIL LL+DLQ++ G+  + I+H+L V   MADR+ 
Sbjct: 172 MAIALKPDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRII 231

Query: 538 VMCEGRIVELAPREILMRSPIHPYTKSLLAAVPFPD 573
           VM  G++VE    E +  +P H YT+ L++AVP  D
Sbjct: 232 VMNGGKVVESGKAEDVFTNPSHAYTRRLMSAVPHAD 267