Pairwise Alignments

Query, 630 a.a., ABC transporter, nucleotide binding/ATPase protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  424 bits (1089), Expect = e-123
 Identities = 247/575 (42%), Positives = 339/575 (58%), Gaps = 46/575 (8%)

Query: 4   GADLLRIENLRVSFSLMGGTIDAVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPK 63
           G  LL +++L V F  +GG   A    S  +  G+   ++GESGSGKSV    IMG+   
Sbjct: 3   GPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGL--- 59

Query: 64  TARVNGRVLFTDPENAAAGPI-----DLLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPL 118
                   + T P +  AG +     DL  L +  R  R + G RI +IFQ+P++  +P+
Sbjct: 60  --------IDTPPGDICAGSVAYRGRDLSSLSEGER--RDLNGRRIAMIFQDPLSHLNPV 109

Query: 119 HTIGNQIDEALRIHSILSPAERAEKMYETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIA 178
           +TIG Q++E   +H + S AE  ++  E L  VG  +P+K ++ YP + SGG RQR MI 
Sbjct: 110 YTIGWQLEEVFTVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIG 169

Query: 179 MALICRPALLIADEPTTALDVTIQAQILKLLRDLQSRLNMSMLLITHDLGVVANIADEVA 238
           MA+  RP +LIADEPTTALDV++QAQIL+LL+ LQ+   +++++ITHDL V AN+AD V 
Sbjct: 170 MAIALRPEILIADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVI 229

Query: 239 VIYQGEIMEAGTVDDIFKAPGHPYLKGLMAAVPHFDMKPGERLKALREIKVDHESLVGKK 298
           V+  G I+E G    +F+ P H Y + L+ A+PH D +   R                  
Sbjct: 230 VMKSGRIVEEGEARAVFENPAHSYTRTLINALPHADDRAPPR------------------ 271

Query: 299 TAAVNKTPGPLLTVDNISKTFTTRKSSWFRKSDANATKAVNSVSFEICRGECLGLVGESG 358
                    P+L V NI K F T  S +F K       AV ++SF++  GE +G+VGESG
Sbjct: 272 --PARPAGKPILEVKNIDK-FYTLSSGFFAK--PARLHAVKNLSFDVAAGETIGIVGESG 326

Query: 359 SGKTTVSKILMRAVRPDEGSITFHRPEGDIDVLNAKDGDLKELRSKIQMVFQDPISSLSP 418
           SGK+TV+++L+       G   FH      DVL      L   R K+QMVFQDP SS++P
Sbjct: 327 SGKSTVARVLLGLNEASGGEALFH----GRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNP 382

Query: 419 RMTVGNILSEPLEIHGRGDAKYR-AEKVRGLVRAIGLGESALNRYPHSFSGGQRQRIGIA 477
           RMTV +I+SEP  IH     K R  ++V  L+  +GL      RYPH FSGGQRQRI IA
Sbjct: 383 RMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIA 442

Query: 478 RALALGPELLICDEPVSALDVSVQAQILNLLKDLQQDLGLTYLFISHNLAVVDYMADRVA 537
           RALA  PEL++CDE VSALDVSVQ Q+++LL +L+  LGL Y+FI+H+L +V + ADR+ 
Sbjct: 443 RALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRII 502

Query: 538 VMCEGRIVELAPREILMRSPIHPYTKSLLAAVPFP 572
           VM  G IVE A  E + R+P H YT+ L+ A P P
Sbjct: 503 VMKSGEIVEHATTEEIFRNPQHAYTRQLINATPKP 537



 Score =  182 bits (462), Expect = 3e-50
 Identities = 115/263 (43%), Positives = 157/263 (59%), Gaps = 17/263 (6%)

Query: 334 ATKAVNSVSFEICRGECLGLVGESGSGKTTVSKILMRAVRPDEGSITFHRPEGDI----- 388
           A +A + VSF +  GE L ++GESGSGK+  +  +M  +    G I      G +     
Sbjct: 22  AFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDIC----AGSVAYRGR 77

Query: 389 DVLNAKDGDLKELRSK-IQMVFQDPISSLSPRMTVGNILSEPLEIHG---RGDAKYRAEK 444
           D+ +  +G+ ++L  + I M+FQDP+S L+P  T+G  L E   +HG     +A+ RA +
Sbjct: 78  DLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGVASGAEARQRAIE 137

Query: 445 VRGLVRAIGLGESALNRYPHSFSGGQRQRIGIARALALGPELLICDEPVSALDVSVQAQI 504
           + G V  I   E  +++YPH FSGGQRQRI I  A+AL PE+LI DEP +ALDVSVQAQI
Sbjct: 138 ILGRV-GIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTTALDVSVQAQI 196

Query: 505 LNLLKDLQQDLGLTYLFISHNLAVVDYMADRVAVMCEGRIVELAPREILMRSPIHPYTKS 564
           L LLK LQ + GL  + I+H+L V   MADRV VM  GRIVE      +  +P H YT++
Sbjct: 197 LELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAVFENPAHSYTRT 256

Query: 565 LLAAVPFPDLDR--PLDFRTIGK 585
           L+ A+P  D DR  P   R  GK
Sbjct: 257 LINALPHAD-DRAPPRPARPAGK 278