Pairwise Alignments

Query, 393 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 386 a.a., Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) from Phaeobacter inhibens DSM 17395

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 21/343 (6%)

Query: 27  ADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGGEGASIQEIADICARLGQACSATAMIF 86
           A ++D    FP E    +    LLGI VP   GG G S          + +A ++ ++ +
Sbjct: 33  AQEIDQKNEFPAELWQEMGELGLLGITVPEEFGGAGMSYLAHTVAVEEIARASASVSLSY 92

Query: 87  AMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLLGSATTEGGIGGNLRNSICAIEVEGDS 146
             H     + ++   ++     ++ R+   + +   A +E G G ++ +     E   D 
Sbjct: 93  GAHSNLCVNQIKLNGNAEQKAKYLPRLVSGEHVGALAMSEAGAGSDVVSMSLRAEKRNDH 152

Query: 147 CRLEKDATVISYGSNADAILITSRAHKDAAPADQVMTVFLKNQYTLEKTHVWDTLGMRGT 206
            RL  +   I+ G +AD +++ ++   DA        +  K       +  +D LGMRG+
Sbjct: 153 YRLNGNKYWITNGPDADTLVVYAKTDPDAGSKGMTAFLIEKEFKGFSTSQHFDKLGMRGS 212

Query: 207 CSDGFLFRG-EAPAAQIFPKPFAEI-AAQSMLASSHLLWSAVWYGIASDAVLRAQSFVRA 264
            +   +F   E P   +  +    +    S L    ++ + +  GI +  +     +++ 
Sbjct: 213 NTAELVFEDVEVPFENVLGEEGKGVRVLMSGLDYERVVLAGIGTGIMAACMDEMMPYMK- 271

Query: 265 AARKSPGTAPPGAIRL-----AEVSTKLQVVKSNIIAGIKAYEDTKSDPEKLMSMAFAVA 319
             RK  G  P G  +L     A++ T +   ++ +      YE  K+  +  ++   A A
Sbjct: 272 -ERKQFG-QPIGNFQLMQGKIADMYTAMNTARAYV------YEVAKACDKGTVTRQDAAA 323

Query: 320 MNNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLRDA 362
                + +SE  +     A+   G  GY +  P  +GR  RDA
Sbjct: 324 ---CCLYASEVAMTQAHQAVQAFGGAGYLSDNP--VGRIFRDA 361