Pairwise Alignments

Query, 393 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 387 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 47.8 bits (112), Expect = 5e-10
 Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 25/345 (7%)

Query: 27  ADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGGEG-------ASIQEIADICARLGQAC 79
           A + D +  FP      +    LLGI V  + GG G        +++EI+   A +G + 
Sbjct: 33  AAETDRSNAFPNALWPEMGELGLLGITVDEAYGGAGMGYLAHTVAVEEISRASASIGLSY 92

Query: 80  SATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLLGSATTEGGIGGNLRNSICA 139
            A + +  ++ IKL+     G D+       + V+G  +    A +E G G ++      
Sbjct: 93  GAHSNL-CVNQIKLN-----GTDAQKEKYLPKLVSGAHVG-ALAMSEAGAGSDVVGMKLR 145

Query: 140 IEVEGDSCRLEKDATVISYGSNADAILITSRAHKDAAPADQVMTVFLKNQYTLEKTHVWD 199
            E   D  RL      I+ G +AD +++ ++   +A        +  K       +  +D
Sbjct: 146 AEKRNDHYRLNGTKYWITNGPDADTLVVYAKTDPEAGSKGITAFLIEKEMAGFSTSPHFD 205

Query: 200 TLGMRGTCSDGFLFRG-EAPAAQIFPKPFAEIAA-QSMLASSHLLWSAVWYGIASDAVLR 257
            LGMRG+ +   +F   E P   +  +    +A   S L    ++ S V  GI +  +  
Sbjct: 206 KLGMRGSNTAELIFEDVEVPFENVLGEEGRGVAVLMSGLDYERVVLSGVNIGIMAGCLDE 265

Query: 258 AQSFVRAAARKSPGTAPPGAIRLAEVSTKLQVVKSNIIAGIKAYEDTKSDPEKLMSMAFA 317
              ++    R+  G  P G  +L +          N  A   AYE  K+     ++   A
Sbjct: 266 VMPYM--TERRQFG-EPIGNFQLMQGKIADMYTAMN-SARAYAYEVAKACDRGEVTRQDA 321

Query: 318 VAMNNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLRDA 362
            A     + +SE  +++   A+   G  G+ N +P  + R  RDA
Sbjct: 322 AA---CVLYASEEGMKVAHQAVQAMGGAGFLNDSP--VARMFRDA 361