Pairwise Alignments

Query, 393 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 79/371 (21%), Positives = 139/371 (37%), Gaps = 34/371 (9%)

Query: 16  AGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGGEGASIQEIADICARL 75
           A  +A  AAK     D    FP++ +          +  P S GG G S  + + I   L
Sbjct: 21  ADELAPFAAKW----DEEHHFPKDVIQKAGELGFCSLYSPESEGGMGLSRLDASIIFEEL 76

Query: 76  GQACSATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLLGSATTEGGIGGNLRN 135
            + C+AT  +  +H++    +   G D T    +   +   Q+L     TE G G +  +
Sbjct: 77  SKGCTATTAMLTIHNMATWMVTTWGTD-TLRQAWSEPLTTGQMLASYCLTEPGAGSDAAS 135

Query: 136 SICAIEVEGDSCRLEKDATVISYGSNADAILITSRAHKD--------AAPADQVMTVFLK 187
                  EGD   +      IS   + + +++  R  +         A PAD    ++ K
Sbjct: 136 LQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPKGISAIAIPADSEGIIYGK 195

Query: 188 NQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQIFPKPFAEIA-AQSMLASSHLLWSAV 246
                E    W+    R    D        P A +  +       A   L    +  +  
Sbjct: 196 ----AEDKMGWNAQPTRLVTFDNV----RVPVANLLGEEGQGFTFAMKGLDGGRINIATC 247

Query: 247 WYGIASDAVLRAQSFVRAAARKSPGTAPPGAI--RLAEVSTKLQVVKSNIIAGIKAYEDT 304
             G A  A+ RA  ++    +     A   A+  +LA+++T+L  V +  +  + A++  
Sbjct: 248 SVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATEL--VAARQMVRLAAFKLD 305

Query: 305 KSDPEKLMSMAFAVAMNNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLRDAHS 364
             DPE     A A      K  +++   ++ D A+ + G  GY     Y L RH RD   
Sbjct: 306 SGDPEATAYCAMA------KRFATDVGFQVCDAALQIHGGYGYIR--EYPLERHFRDVRV 357

Query: 365 ARLMISNDRIL 375
            +++   + I+
Sbjct: 358 HQILEGTNEIM 368