Pairwise Alignments

Query, 308 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (439), Expect = 4e-48
 Identities = 107/293 (36%), Positives = 163/293 (55%), Gaps = 7/293 (2%)

Query: 7   RFLPSLSLLAAFEAASRTGSVTAAARELGLTQGAVSRQILALEEQLGVALFLRERQTIRL 66
           R LP L+ L  FEAA+R  S T AA EL +TQ AVS QI ALEE LG+ LF R  +++ L
Sbjct: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62

Query: 67  TRAGEGYAREIREALRRISTASLNLRANPDGGTLNLGVLPSFGTRWLVPRLPDFIARHPG 126
           T  G+ Y  +I++    ++ A+  L    + G L + + PSF  +WLVPRL DF  + P 
Sbjct: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122

Query: 127 ISVNLLTRSSLFDFRTDTVDAAIHFGLPHWPGTELAFLMHEKVIPVCSPAFKELYG---L 183
           I V +          TD VD AI++G   WPG     L  E +IP+CSPA   L G   +
Sbjct: 123 IDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPAL--LLGNKPM 180

Query: 184 SRPDDLLHVPLLHMTTRPDAWEQWFRSHDVRFDNV-HGMLFDQFTTIAEASSAGVGASLV 242
            +  DL +  LLH T+R D W+Q+ + + +   NV HG +F   T + +A++ G G +L 
Sbjct: 181 EKLSDLAYHTLLHDTSRKD-WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALG 239

Query: 243 PSFMIEEELRSGRLVSAVAGEVESEEAYYLACMPDRATYPPLESFRRWIVYQA 295
            + + + E+ +GRL++     + +  A+Y+ C   +A    + +FR W++ +A
Sbjct: 240 NNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKA 292