Pairwise Alignments

Query, 354 a.a., lysyl-tRNA synthetase from Agrobacterium fabrum C58

Subject, 324 a.a., elongation factor P--(R)-beta-lysine ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (459), Expect = 2e-50
 Identities = 122/340 (35%), Positives = 178/340 (52%), Gaps = 28/340 (8%)

Query: 12  WTPDVHADRRAFLLGRNAIQSAFRGYFARADFLEVDTATLQVSPGNEAHLHAFATDGLTP 71
           W P     +   L  R  +    R +FA  + LEV+T  +  +   + HLH F T+ + P
Sbjct: 6   WMPTASISQ---LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGP 62

Query: 72  G-GEAVPLYLHTSPEFACKKLLAAGEKRISCFAHVYRNRERGPLHHPEFTMLEWYRVGET 130
           G  +   L+L TSPEF  K+LLAAG   I      +RN E G  H+PEFTMLEWYR+G  
Sbjct: 63  GYAKGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFD 122

Query: 131 YESLMKDSANLLALAAETTGTKHFTYRGRSVDPFLEPERLSVAEAFERYAGIDLLATIGR 190
           + +LM +   LL L       +  TY+                EAF    G+  L    R
Sbjct: 123 HHALMDEMDALLQLVLRCGSAERMTYQ----------------EAFLNVLGVCPLEEEMR 166

Query: 191 NGETDERHLAASLTNAGIRVADDDTWADMFSRVIVE-RVEPELGFGRATILDEYPTSEAA 249
               + + +AA+L  + I   ++D   D   +++    +EP++G      + ++P S+AA
Sbjct: 167 ----ELKQVAATLGLSDIAEPEEDR--DTLLQLLFSIGIEPKIGQITPAFVYDFPASQAA 220

Query: 250 LARKSPGDARVAERFELYACGVELANAFGELTDAAEQRRRFEMEMAEKLRVYGETYPLDE 309
           LA+ +P D RVA+RFE+Y  G+ELAN F EL + AEQ  RF+ + A++L +     P+D 
Sbjct: 221 LAKINPADPRVADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDY 280

Query: 310 DFLAAL-AIMPPASGIALGFDRLVMLATGAPRIDLVMWAP 348
             +AAL A +P  +G+ALG DRL+MLA G   ID V   P
Sbjct: 281 HLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320