Pairwise Alignments

Query, 354 a.a., lysyl-tRNA synthetase from Agrobacterium fabrum C58

Subject, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  136 bits (342), Expect = 1e-36
 Identities = 102/333 (30%), Positives = 158/333 (47%), Gaps = 12/333 (3%)

Query: 20  RRAFLLGRNAIQSAFRGYFARADFLEVDTATLQVSPGNEAHLHAFATDGLTPGGEAVPLY 79
           R AF++ R+ + SA R +     F+EV+T  + V PG  A    F T         +P+Y
Sbjct: 180 RNAFIV-RSKVMSAIRNFMISKQFMEVETPMMHVIPGG-ASARPFITHH---NALDMPMY 234

Query: 80  LHTSPEFACKKLLAAGEKRISCFAHVYRNRERGPLHHPEFTMLEWYRVGETYESLMKDSA 139
           L  +PE   K+L+  G  R+      +RN    P H+PEFTM+E+Y     Y+ LM  + 
Sbjct: 235 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTE 294

Query: 140 NLL-ALAAETTGTKHFTYRGRSVDPFLEPERLSVAEAFERYAGIDLLATIGRNGETDERH 198
            LL ++A E  G+    Y   +V+   +  R+S+ +A + Y             +   R 
Sbjct: 295 ELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRD 354

Query: 199 LAASLTNAGIRVADDDTW--ADMFSRVIVERVEPELGFGRATILDEYPTSEAALARKSPG 256
           L  S+  + + V  +  W    +   +  E  EP+L   + T +  YP   + LAR+S  
Sbjct: 355 LMVSIAKS-VHVDVEPFWTCGQLLEEIFGETAEPKL--MQPTFITGYPADISPLARRSDD 411

Query: 257 DARVAERFELYACGVELANAFGELTDAAEQRRRFEMEMAEKLRVYGETYPLDEDFLAALA 316
           +    +RFE +  G E+AN F EL DA +Q  RF+ ++  K     E    D D++ AL 
Sbjct: 412 NPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALE 471

Query: 317 I-MPPASGIALGFDRLVMLATGAPRIDLVMWAP 348
             +PP +G  +G DRLVML T    I  V+  P
Sbjct: 472 HGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504