Pairwise Alignments

Query, 276 a.a., ABC transporter, nucleotide binding/ATPase protein (dipeptide) from Agrobacterium fabrum C58

Subject, 338 a.a., peptide ABC transporter, ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (556), Expect = 1e-61
 Identities = 124/272 (45%), Positives = 173/272 (63%), Gaps = 9/272 (3%)

Query: 2   LVEIENLKIAFQ-----TRTSRFEAVRGVSMKLGT-EKLGIVGESGSGKSLTARALMKLL 55
           L+ +ENL++        T      AVRG+  ++   E L IVGESG GKSLT+ ALM LL
Sbjct: 3   LLHVENLRVDIPMGNSPTPDDMLHAVRGLDFEVERGEMLCIVGESGCGKSLTSLALMDLL 62

Query: 56  PSNADIRADKLAFDGIDVLSASEKQMRQIRGKRAGFILQDPKYSLNPVKTMGAQIAEAWR 115
           P  A   A +L  DGID+L  SE++M  +RG R   I Q+P  SLNP  ++G Q++E   
Sbjct: 63  PRKARRTASRLTLDGIDMLGQSERRMCDLRGNRLAMIFQEPMTSLNPAYSIGDQLSEVLT 122

Query: 116 AHKGGSKRAAMEAAIALLDQVKIRNPRQVASSYAHEVSGGMGQRVMIAMMLAPDPELLIA 175
            H+  S++ A+  A  +L++V I N  +    Y H++SGG+ QRV+IAM L  +P+L+IA
Sbjct: 123 QHRKVSRKDALARAAQMLEKVGISNAAERLRQYPHQLSGGLRQRVIIAMALMCEPDLIIA 182

Query: 176 DEPTSALDATVQAEILRLIEELVSERGMGLILISHDLPLVSHFCDRVAVMYSGRVMEELK 235
           DEPT+ALD T+QA+ILRLI ++  E G+ +I I+HDL LV+   DRVAVMY+G ++E   
Sbjct: 183 DEPTTALDVTIQAQILRLIRDIQKELGLAVIFITHDLGLVARIADRVAVMYAGEIVETAP 242

Query: 236 ASELLK-AEHPYTKGLLNC--IPSLTHPRERL 264
           A +L +  +HPYT+GLL    IP  T P E L
Sbjct: 243 ARQLFENPQHPYTRGLLASIPIPGRTKPGEAL 274