Pairwise Alignments

Query, 276 a.a., ABC transporter, nucleotide binding/ATPase protein (dipeptide) from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  219 bits (558), Expect = 1e-61
 Identities = 118/257 (45%), Positives = 168/257 (65%), Gaps = 3/257 (1%)

Query: 2   LVEIENLKIAFQTRTSRFEAVRGVSMKLGT-EKLGIVGESGSGKSLTARALMKLLPSNAD 60
           L+++ NL ++F T     +AV+ VS  +   E L IVGESGSGKS++  ALM+LLP NA 
Sbjct: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65

Query: 61  IRADK-LAFDGIDVLSASEKQMRQIRGKRAGFILQDPKYSLNPVKTMGAQIAEAWRAHKG 119
           I  +  + F+G ++L+ ++ QMR+IRG R G I Q+P  SLNP   +G Q+AEA R H+ 
Sbjct: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125

Query: 120 GSKRAAMEAAIALLDQVKIRNPRQVASSYAHEVSGGMGQRVMIAMMLAPDPELLIADEPT 179
            S+  A +  + L   V + +P+     + HE SGG  QR+MIAM L  +P++LIADEPT
Sbjct: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185

Query: 180 SALDATVQAEILRLIEELVSERGMGLILISHDLPLVSHFCDRVAVMYSGRVMEELKASEL 239
           +ALD TVQAE+LRLI+E+ +  GM ++ I+HDL +V    DRV VM  G V+E+    +L
Sbjct: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245

Query: 240 -LKAEHPYTKGLLNCIP 255
            L+ EH YT+ L+N IP
Sbjct: 246 FLQPEHDYTRMLINSIP 262



 Score =  163 bits (412), Expect = 9e-45
 Identities = 106/260 (40%), Positives = 150/260 (57%), Gaps = 18/260 (6%)

Query: 2   LVEIENLKIAF-------QTRTSRFEAVRGVSMKLGT-EKLGIVGESGSGKSLTARALMK 53
           L++ E++++ F         R   FEAV+G+S++L   E LGIVGESGSGKS   RAL+ 
Sbjct: 276 LLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIG 335

Query: 54  LLPSNADIRADKLAFDGIDVLSASEKQMRQIRGKRAGFILQDPKYSLNPVKTMGAQIAEA 113
           LLPS   I     AF G D  + SEKQ   ++ K    + QDP  SL+P  T+G  I E 
Sbjct: 336 LLPSTGQI-----AFKGQDFRALSEKQRLALK-KDIQMVFQDPYGSLSPRMTVGEIITEG 389

Query: 114 WRAHKGG-SKRAAMEAAIALLDQVKIRNPRQVASSYAHEVSGGMGQRVMIAMMLAPDPEL 172
              H+   SK   M+ A   L++V++ +P  + + Y HE SGG  QR+ IA  L  +P  
Sbjct: 390 LLVHQPHISKLERMQRARRALEEVRL-DPNSI-NRYPHEFSGGQRQRIAIARALILEPSF 447

Query: 173 LIADEPTSALDATVQAEILRLIEELVSERGMGLILISHDLPLVSHFCDRVAVMYSGRVME 232
           ++ DEPTSALD +VQ  ++ L++E+   R +G + ISHDL +V    DRV VM  G+VME
Sbjct: 448 ILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVME 507

Query: 233 ELKASELL-KAEHPYTKGLL 251
           +  A  +    +H YTK L+
Sbjct: 508 QGSAESIFHNPQHEYTKKLI 527