Pairwise Alignments

Query, 276 a.a., ABC transporter, nucleotide binding/ATPase protein (dipeptide) from Agrobacterium fabrum C58

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (531), Expect = 8e-59
 Identities = 117/268 (43%), Positives = 165/268 (61%), Gaps = 3/268 (1%)

Query: 2   LVEIENLKIAFQTRTSRFEAVRGVSMKLGT-EKLGIVGESGSGKSLTARALMKLLPSNAD 60
           L+++++L++ F T+     AV  ++  L   E LGIVGESGSGKS T  A+M LL  N  
Sbjct: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63

Query: 61  IRADKLAFDGIDVLSASEKQMRQIRGKRAGFILQDPKYSLNPVKTMGAQIAEAWRAHKGG 120
           I      F+G ++L+  E+++ ++R ++   I QDP  SLNP   +  Q+ E    HKG 
Sbjct: 64  ITGSA-KFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122

Query: 121 SKRAAMEAAIALLDQVKIRNPRQVASSYAHEVSGGMGQRVMIAMMLAPDPELLIADEPTS 180
            K  A E ++ +L+ VKI   R+  + Y HE SGGM QRVMIAM L   P+LLIADEPT+
Sbjct: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182

Query: 181 ALDATVQAEILRLIEELVSERGMGLILISHDLPLVSHFCDRVAVMYSGRVMEELKASELL 240
           ALD TVQA+I+ L+ EL  E    +I+I+HDL +V+  CD+V VMY+GR ME    +++ 
Sbjct: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242

Query: 241 -KAEHPYTKGLLNCIPSLTHPRERLPVL 267
               HPY +GLL+ IP L    E LP +
Sbjct: 243 YNPSHPYAEGLLSAIPRLDTEGEVLPTI 270