Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  138 bits (347), Expect = 2e-37
 Identities = 94/307 (30%), Positives = 165/307 (53%), Gaps = 18/307 (5%)

Query: 6   IENTKTGVSRAEGSRPP---RLAPNY------WPFVIPALVVISAVIVFPWVFTLWMSVH 56
           +++T   V     SRP    RLA  +      + F++P L+    + + P + +L++S  
Sbjct: 1   MQDTAVAVGTGASSRPAAQGRLARIWASHGAGYMFLLPWLIGFFGLTLGPAIASLYLSFT 60

Query: 57  RWTLGQEQSFIGFDNYIRLAS-DLRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFP 115
            + L +   +IG  NY R+A+ D +F  ++  T +Y VLSV   L    L A++ D    
Sbjct: 61  NFDLIRAPEWIGTANYARIATADPKFAAAVKVTFLYVVLSVPFKLAFALLVAILLDRGVR 120

Query: 116 LRGFLRGVFVMP-MMATPVAIALVWTMMFHPQLGVLNYLLSLIGIGPLEWIYNQSTVIPS 174
                R +F +P ++   VAIA++W  +F    G++N LL+  GI    WI +    I +
Sbjct: 121 GLTVYRAIFYLPSLLGGSVAIAVLWRQLFAGD-GLINSLLAQFGIEGPSWISHPDYSIWT 179

Query: 175 LVLVETWQWTPLVMLIVLGGLAAVPREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVI 234
           LV++  WQ+    M+I L GL  +P + YE+A +DGA+ +++F  +T+P++ P +    +
Sbjct: 180 LVVLSVWQFGS-PMIIFLAGLRQIPTDMYEAASLDGASKFRQFYKITLPLLTPVIFFNAV 238

Query: 235 IRSIDAVKSFDIIYAMTQGGPGTASETI--NIYLYNTAFSYYDIGYGSAMAVVFFVII-- 290
           +++IDA K+F   + ++ G  G  + T+   +YLY  AF  + +GY SA+A +  +II  
Sbjct: 239 VQTIDAFKAFTPAFIISGGTGGPINSTLFYTLYLYQEAFGNFRMGYASALAWILVLIIGL 298

Query: 291 -VALSFV 296
             A SF+
Sbjct: 299 FTAFSFL 305