Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 351 a.a., sugar ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  157 bits (398), Expect = 3e-43
 Identities = 93/277 (33%), Positives = 156/277 (56%), Gaps = 12/277 (4%)

Query: 32  VIPALVVISAVIVFPWVFTLWMSVHRW--TLG--QEQSFIGFDNYIRLAS-DLRFWESLW 86
           ++P  ++   V++ P +   +MS   W  T G      F+G +NY  L   D RF E++ 
Sbjct: 67  LLPGQILSLMVLITPLLVAFYMSFTDWAPTRGGLAAARFVGIENYQELLIYDTRFVEAVV 126

Query: 87  HTLIYTVLSVVAPLFLGTLAALVFDAQFPLRGFLRGVFVMPMMATPVAIALVWTMMFHPQ 146
            TL+ + + +     LG   A++F  +F  +     V + PMM  PV +   + M+F   
Sbjct: 127 RTLLLSAVCLSIEFALGLGLAVLFLRRFRGKAVAFSVVLTPMMVLPVVVGYTFWMLFQSN 186

Query: 147 LGVLNYLLSLI---GIGPLEWIYNQSTVIPSLVLVETWQWTPLVMLIVLGGLAAVPREPY 203
            G +N ++ LI   G  P EW  +    +  +V+ E W WTPL  LI+L GL A+P  P 
Sbjct: 187 -GPVNQIIELIAGPGSAP-EWFRSTPFALAIVVITEVWHWTPLFFLILLSGLNALPENPV 244

Query: 204 ESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAVKSFDIIYAMTQGGPGTASETIN 263
            +A I GA+  Q F  + +PM+ P +++A +IRS++ VK FD ++ +T+GGPGT++ET++
Sbjct: 245 RAAVILGASPRQIFWRVVLPMLKPVIVVAFVIRSMEIVKLFDEVFMLTRGGPGTSTETVS 304

Query: 264 IYLYNTAFSYYDIGYGSAMAVVFFVIIVALSFVLLMV 300
           +Y+Y  AF+ + + YG+A A  F V++  L+ V L++
Sbjct: 305 LYIYKLAFNDFQLAYGAAAA--FLVLLGTLTLVHLLL 339