Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 314 a.a., sugar ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  187 bits (476), Expect = 2e-52
 Identities = 97/299 (32%), Positives = 173/299 (57%), Gaps = 4/299 (1%)

Query: 2   ASVSIENTKTGVSRAEGSRPPRLAPNY--WPFVIPALVVISAVIVFPWVFTLWMSVHRWT 59
           A+VS+ +     +    ++P R       +  V PAL ++  +++ P    + +S   + 
Sbjct: 4   AAVSLRDLDALTTARASAKPRRRGRGTVAYGLVAPALTLMLLMLLGPLAGVIALSFTDYQ 63

Query: 60  LGQEQ-SFIGFDNYIRLASDLRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFPLRG 118
           LG    ++IG  NY +L +D  FW SL +TL Y V+ V   + LG   A++ ++   LR 
Sbjct: 64  LGAPSFAWIGLANYQQLFADRVFWISLTNTLTYAVIVVPGSVALGLGVAMLIESGTHLRA 123

Query: 119 FLRGVFVMPMMATPVAIALVWTMMFHPQLGVLNYLLSLIGIGPLEWIYNQSTVIPSLVLV 178
           F R ++ +P+MAT +A+A+VW  M HPQ G++N L+ ++G+ P  W+ ++ T + +L  +
Sbjct: 124 FYRTIYFLPVMATLIAMAIVWEFMLHPQFGLVNGLIKMVGLAPHPWLQDRGTALYALCAI 183

Query: 179 ETWQWTPLVMLIVLGGLAAVPREPYESAEIDG-ANAWQKFRYLTMPMIAPFLMIAVIIRS 237
             WQ     M++ L GL ++P+  Y++AEIDG A+AW +FR +T PM+ P  +  V+I  
Sbjct: 184 GIWQAVGFNMVLFLAGLMSIPKHLYDAAEIDGAASAWSRFRLVTWPMLGPVTLFVVVITG 243

Query: 238 IDAVKSFDIIYAMTQGGPGTASETINIYLYNTAFSYYDIGYGSAMAVVFFVIIVALSFV 296
           I + + FD ++ +T+GGP  ++E +   +Y   F ++  GY +A+ VVF  +++ L+ V
Sbjct: 244 IRSFQVFDTVHVLTKGGPSKSTEVLIHTMYMEGFEFFRSGYAAAVTVVFLCLVLLLTLV 302