Pairwise Alignments

Query, 614 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 540 a.a., Permeases of the major facilitator superfamily from Pseudomonas fluorescens FW300-N1B4

 Score =  502 bits (1293), Expect = e-146
 Identities = 248/429 (57%), Positives = 310/429 (72%), Gaps = 8/429 (1%)

Query: 4   EEKKVIFASSLGTVFEWYDFYLYGSLAIYIGANFFSQYPETTRNIFALLAFAAGFLVRPF 63
           E +KVIFASSLGTVFEWYDF+LYG+LA  I   FF+   +TT  IFAL+AFAAGF+VRPF
Sbjct: 19  ETQKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFIVRPF 78

Query: 64  GALVFGRLGDIVGRKYTFLITILIMGVSTFLVGVLPGASQIGIAAPIILIILRMLQGLAL 123
           GALVFGRLGD++GRKYTFL TI++MGV+TF VG+LP  + IGIAAPIIL++LRMLQGLAL
Sbjct: 79  GALVFGRLGDMIGRKYTFLATIVLMGVATFCVGLLPTYASIGIAAPIILVVLRMLQGLAL 138

Query: 124 GGEYGGAATYVAEHAPNGRRGYYTSWIQTTATLGLFLSLMVILGVQFALGKEAFAAWGWR 183
           GGEYGGAATYVAEHAP G+RG++TSWIQ+TATLGL LSL+V+LG ++  G + F  WGWR
Sbjct: 139 GGEYGGAATYVAEHAPMGKRGFHTSWIQSTATLGLLLSLLVVLGCRYFTG-DQFEVWGWR 197

Query: 184 IPFLVSVLLLGVSVWIRLKMNESPAFKKMKEEGKTSKAPLSEAFGQWKNAKIALLALVGA 243
           IPFL S++LLG+S WIRL ++ESPAF KMKEEGK  K+PL ++FG+W N K+ L+AL   
Sbjct: 198 IPFLFSIVLLGISTWIRLSLHESPAFVKMKEEGKLCKSPLRDSFGKWDNLKVVLIALFSI 257

Query: 244 VIGQAVVWYTGQFYALFFLQSILKVDGQSANIMVAAALILGTGFFVLFGWLSDKIGRKPI 303
             GQAV +Y  QFY LFFL   LK+D   AN ++  ++I+G  FF+ FGWLSDK+GRKP+
Sbjct: 258 NAGQAVTFYAAQFYVLFFLTQFLKMDPALANSLLIVSVIIGAPFFIFFGWLSDKVGRKPV 317

Query: 304 IMAGLILAMLTYFPLFKALTWAGNPALAQAQSTVRATVTAAPGDCKFQFNPTGTAKFTTS 363
           +M GL+LA   YFP+FK L    NPA+ QA      TV A P  C FQF+P G AKF + 
Sbjct: 318 LMIGLLLATALYFPIFKTLAHYANPAIDQASRQAPITVLADPATCTFQFDPVGKAKFDSP 377

Query: 364 CDIATSFLTRNSVPYDVVAGAAGEPASVKLGDATIASYDAIA-------AGADASAKDKA 416
           CD   +FL +  +PY+  A  AG    V +G+  I  YD  A       AG  + A  + 
Sbjct: 378 CDKVKTFLVKQGLPYNSEAAPAGSAVQVSIGEVKIDGYDEAALRGAVTLAGYPSQADTQL 437

Query: 417 FQKQINIAL 425
             K + +AL
Sbjct: 438 INKPMIVAL 446



 Score =  143 bits (361), Expect = 2e-38
 Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 3/123 (2%)

Query: 488 AAEMAVYTIAGGGAFTMVADPAAVNWIVIIAVLTVLVIYVTMVYGPIAALLVELFPTRIR 547
           AA     T+AG   +   AD   +N  +I+A++  L+I   M YGP+AAL+VELFPTRIR
Sbjct: 418 AALRGAVTLAG---YPSQADTQLINKPMIVALIVALIIISAMCYGPLAALMVELFPTRIR 474

Query: 548 YSGMSLPYHIGNGWFGGLLPATAFAMSAAKGDIYYGLWYPIVFAGITLVIGLLFLPETKD 607
           Y+ MSLPYHIGNGWFGG LP  +FA+    GDI+YGLWYP+V  G++LV+G++ L ETKD
Sbjct: 475 YTSMSLPYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVVITGVSLVVGMMCLRETKD 534

Query: 608 RDI 610
            D+
Sbjct: 535 VDL 537