Pairwise Alignments

Query, 281 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 261 a.a., endonuclease from Herbaspirillum seropedicae SmR1

 Score =  128 bits (321), Expect = 1e-34
 Identities = 89/239 (37%), Positives = 124/239 (51%), Gaps = 8/239 (3%)

Query: 38  APATKDHSFPV-IASYNVHKCVGRDRKFDPDRTSRVIQEIGADIIALQEADSRFGERTGL 96
           AP      +P+ +A+YN+H  VG D +F P+R + V+ E+ AD++ALQE      ++  +
Sbjct: 27  APVPGRDPWPLTVATYNIHGAVGTDGRFAPERVAAVLDELQADVVALQEVPLGGADQVDV 86

Query: 97  LDLARLERESGLVPVPVQAGVKAHGWHGNVVLFREGAVR-DVHTLKLPGLEPRGALVVEL 155
           L L R          P          +GN VL R   +  +   L     EPRGAL  ++
Sbjct: 87  LALLRAHTGMFAAEGPTMESPARR--YGNAVLSRYPILATESIDLSFGSREPRGALDADI 144

Query: 156 DLKSGGTLRVIAAHFGLLRHSRAQQAKALVGLLEARNECATILMGDLNEWRLGNGSSLNT 215
           D + G  LRV+A H GL    R  Q K L+   +  N+   IL+GD+NEW +  G +L  
Sbjct: 145 DCR-GQLLRVVATHLGLKPAERRAQIKRLLQAFDT-NDAPVILLGDVNEWFMW-GRTLRW 201

Query: 216 FRDAFGTLPPAVPSFPSNLPVLALDRIIANREGLIEQVEAHDSALARIASDHLPLKAAI 274
               F   P A P+FPS  PV ALDRI  +    ++ +  H SALAR+ASDHLPL A I
Sbjct: 202 LVGHFEAAP-APPTFPSRWPVFALDRIWISPRRRLQHLAVHRSALARVASDHLPLLAHI 259