Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 9/278 (3%)

Query: 14  LALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAISVPQLIKDWPVVKQRL 73
           L L+     WGG+ +  ++A     P      R   A   +F ++  QL++    ++Q  
Sbjct: 7   LQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVA--QLLRRSLPIRQHW 64

Query: 74  PYFFVLGSVGYTA-FNVFLYTALQHTSAINAAVIQAGIPMVIFVLNFVLFRTRVLFGQIA 132
           P+F +LG +     F +F Y AL   +    +++ +  P+   V+ F+   T +    +A
Sbjct: 65  PHFLILGLINTAVPFLLFAYAALT-LNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVA 123

Query: 133 GFCLTISGVALLASHGDPLSLLQLEMNVGDAVMLLAVLVYAIYTVILRWKPAVDWRTLMA 192
           G  L +SGVA++   G  +  +     +      LA   Y + T   +  P +       
Sbjct: 124 GLLLGVSGVAVIV--GWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQLSAFENAH 181

Query: 193 IPAFFALLTSVPLVFFEMSRESLIWPDQKGWMLVVYAGIFASLIAQILYIKGVEQIGANR 252
              + A L   PL++F   RE+   P    W  V+  G+  + +A ++Y + V+ IGA  
Sbjct: 182 GSMWAACLWVAPLMWFVPLRET---PSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAAS 238

Query: 253 AGLFINLVPVFGTLLSVFVLSETLHTYQIAALFMALAG 290
                 L+PVFG L   ++L E +    +    + LAG
Sbjct: 239 TLSVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAG 276



 Score = 27.3 bits (59), Expect = 4e-04
 Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 209 EMSRESLIWPDQKGWMLVVYAGIFASLIAQILYIKGVEQIGANRAGLFINLVPVFGTLLS 268
           ++ R SL  P ++ W   +  G+  + +  +L+      +  +   +  +  P++G ++ 
Sbjct: 52  QLLRRSL--PIRQHWPHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIG 109

Query: 269 VFVLSETLHTYQIAALFMALAGIAV 293
                  L    +A L + ++G+AV
Sbjct: 110 FLWHGTPLSRKAVAGLLLGVSGVAV 134