Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 302 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 26/304 (8%)

Query: 1   MKKRNISVPSKAYLALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAIS-- 58
           M+ R  ++   A   L++    WG   VA K+A   ISPM    LR   A+ +++A S  
Sbjct: 1   MRSRQTALDGLAMSLLVVLCASWGVQQVAIKVASAGISPMFQAGLRSAGALGLLWAWSAA 60

Query: 59  --VPQLIKDWPVVKQRLPYFFVLGSVGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIFV 116
             VP L +D       L    V+G + +    +F+Y  L +T+A  + +     P  + +
Sbjct: 61  RGVPILARDGS-----LGLGLVIGLL-FGGEILFIYWGLSYTTAARSVLFLYTAPFFVAL 114

Query: 117 -LNFVLFRTRVLFGQIAGFCLTISGVALLASHGDPLSLLQLEMNVGDAVMLLAVLVYAIY 175
             +  L   R+    I G     +GV  LA   D L+L      +GDA++LLA +++A  
Sbjct: 115 GAHVFLPGERLRRTDILGLACAFAGV--LAVVADGLTLPDRRAMIGDAMVLLAAILWAAT 172

Query: 176 TVILRWKPAVDW---RTL---MAIPAFFALLTSVPLVFFEMSRESLIWPDQKGWMLVVYA 229
           TV+++  P       +TL   + + A   L  S  L         L  P  +    + Y 
Sbjct: 173 TVVIKASPLAGLSANKTLVYQLGVSAVLLLGLSAGL-----GEAGLFDPTPRVLAAMAYQ 227

Query: 230 GIFASLIAQILYIKGVEQIGANRAGLFINLVPVFGTLLSVFVLSETLHTYQIAALFMALA 289
            I  +  + +++   + +  A++   F  L PVFG L    +L E + +    AL M L 
Sbjct: 228 TIGVAFASYLVWFWMITRYPASKLSAFSFLTPVFGVLAGAVMLGERVSSG--LALAMGLI 285

Query: 290 GIAV 293
           G  +
Sbjct: 286 GFGI 289