Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 299 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score =  100 bits (250), Expect = 3e-26
 Identities = 67/286 (23%), Positives = 134/286 (46%), Gaps = 9/286 (3%)

Query: 13  YLALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAISVPQLIKDWPVVKQR 72
           +L +I A     G  + GK+ +  +S    TFLR+++A AII  + + +  K+  + K  
Sbjct: 11  FLLMIPAVFFGAGAFITGKIGILELSWDELTFLRFLIASAIILPLVLKKEHKNLKLKKND 70

Query: 73  LPYFFVLGSVGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIFVLNFVLFRTRVLFGQIA 132
                + G  G   ++   + +L++ +AIN+A++ A  PMV  ++  V+        +I 
Sbjct: 71  AYIVILAGLFGMFGYHALFFMSLEYITAINSALLMATTPMVTSIIAAVVLGEYFGIKRIF 130

Query: 133 GFCLTISGVALLASHGDPLSLLQLEMNVGDAVMLLAVLVYAIYTVI-----LRWKPAVDW 187
              +   GV L  ++G+   L  L  N+GD +M  AVL  A+Y V+      ++ P++  
Sbjct: 131 AVFIAFFGVLLTITNGNLEVLKNLSFNIGDVIMFSAVLCMALYAVLSKKVAQKYSPSL-- 188

Query: 188 RTLMAIPAFFALLTSVPLVFFEMSRESLIWPDQKGWMLVVYAGIFASLIAQILYIKGVEQ 247
             ++       ++  +P +  +     ++    + W+ ++Y  +FAS++AQ+L    ++ 
Sbjct: 189 --ILTYGYILTVVLLIPYMILKNPINVILNASLETWLSIIYMAVFASVLAQLLQQISLKY 246

Query: 248 IGANRAGLFINLVPVFGTLLSVFVLSETLHTYQIAALFMALAGIAV 293
            GA++  LF   VP+    LS   L E        +    + G+ +
Sbjct: 247 HGASKTMLFYQFVPIIVIGLSAIFLKEPFTKITAISTLFIMGGVYI 292