Pairwise Alignments

Query, 300 a.a., RNA polymerase sigma-32 factor from Agrobacterium fabrum C58

Subject, 301 a.a., RNA polymerase factor sigma-32 from Sinorhizobium meliloti 1021

 Score =  523 bits (1346), Expect = e-153
 Identities = 260/299 (86%), Positives = 282/299 (94%)

Query: 1   MARNSLPTITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL 60
           MARN+LPTI AGE GLNRYLDEIRKFPMLEPQEEYML KRY EH DR AAHKLVTSHLRL
Sbjct: 1   MARNTLPTIAAGEGGLNRYLDEIRKFPMLEPQEEYMLAKRYQEHDDRKAAHKLVTSHLRL 60

Query: 61  VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS 120
           VAKIAMGYRGYGLPIGEV+SEGNVGLMQAVKKF+P+RGFRLATYAMWWIKA+IQEYILRS
Sbjct: 61  VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFEPDRGFRLATYAMWWIKAAIQEYILRS 120

Query: 121 WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVKEIATKLQVSEEEVISMNRRL 180
           WSLVKMGTTANQKRLFFNLRRLKGRIQA+D+GDLKPE VKEIAT L+VSEEEV+SMNRRL
Sbjct: 121 WSLVKMGTTANQKRLFFNLRRLKGRIQALDEGDLKPEQVKEIATTLKVSEEEVVSMNRRL 180

Query: 181 HGDASLNAPIKASEGESGQWQDWLVDDHESQEAVLIEQDELETRRRMLAKAMGVLNERER 240
            GDASLNAPIKASEG+SGQWQDWLVDDH++QE +LIEQDELE+RR +LA AM VLN+RER
Sbjct: 181 SGDASLNAPIKASEGDSGQWQDWLVDDHDNQEQILIEQDELESRRALLANAMKVLNDRER 240

Query: 241 RIFEARRLAEDPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALEAARALRVVD 299
           RIFEARRL E+P+TLE+LS+EFDISRERVRQIEVRAFEKVQEAV+K ALE A ALRVV+
Sbjct: 241 RIFEARRLTEEPITLEDLSTEFDISRERVRQIEVRAFEKVQEAVRKAALERASALRVVE 299